Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27489 | 82690;82691;82692 | chr2:178563667;178563666;178563665 | chr2:179428394;179428393;179428392 |
N2AB | 25848 | 77767;77768;77769 | chr2:178563667;178563666;178563665 | chr2:179428394;179428393;179428392 |
N2A | 24921 | 74986;74987;74988 | chr2:178563667;178563666;178563665 | chr2:179428394;179428393;179428392 |
N2B | 18424 | 55495;55496;55497 | chr2:178563667;178563666;178563665 | chr2:179428394;179428393;179428392 |
Novex-1 | 18549 | 55870;55871;55872 | chr2:178563667;178563666;178563665 | chr2:179428394;179428393;179428392 |
Novex-2 | 18616 | 56071;56072;56073 | chr2:178563667;178563666;178563665 | chr2:179428394;179428393;179428392 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.125 | N | 0.373 | 0.318 | 0.349870743963 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77346E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0967 | likely_benign | 0.1249 | benign | -0.927 | Destabilizing | 0.489 | N | 0.414 | neutral | N | 0.506456441 | None | None | N |
T/C | 0.3087 | likely_benign | 0.3568 | ambiguous | -0.657 | Destabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | N |
T/D | 0.625 | likely_pathogenic | 0.7038 | pathogenic | -0.862 | Destabilizing | 0.956 | D | 0.583 | neutral | None | None | None | None | N |
T/E | 0.5222 | ambiguous | 0.5848 | pathogenic | -0.715 | Destabilizing | 0.956 | D | 0.581 | neutral | None | None | None | None | N |
T/F | 0.2869 | likely_benign | 0.3556 | ambiguous | -0.611 | Destabilizing | 0.956 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/G | 0.2521 | likely_benign | 0.3368 | benign | -1.317 | Destabilizing | 0.754 | D | 0.581 | neutral | None | None | None | None | N |
T/H | 0.3312 | likely_benign | 0.3647 | ambiguous | -1.49 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
T/I | 0.2086 | likely_benign | 0.25 | benign | 0.07 | Stabilizing | 0.125 | N | 0.373 | neutral | N | 0.494894771 | None | None | N |
T/K | 0.3979 | ambiguous | 0.434 | ambiguous | -0.613 | Destabilizing | 0.942 | D | 0.578 | neutral | N | 0.519847026 | None | None | N |
T/L | 0.1117 | likely_benign | 0.1319 | benign | 0.07 | Stabilizing | 0.303 | N | 0.459 | neutral | None | None | None | None | N |
T/M | 0.0962 | likely_benign | 0.1049 | benign | 0.032 | Stabilizing | 0.559 | D | 0.443 | neutral | None | None | None | None | N |
T/N | 0.156 | likely_benign | 0.1871 | benign | -1.057 | Destabilizing | 0.956 | D | 0.473 | neutral | None | None | None | None | N |
T/P | 0.6342 | likely_pathogenic | 0.7192 | pathogenic | -0.229 | Destabilizing | 0.97 | D | 0.615 | neutral | D | 0.524355331 | None | None | N |
T/Q | 0.3267 | likely_benign | 0.3536 | ambiguous | -0.913 | Destabilizing | 0.956 | D | 0.619 | neutral | None | None | None | None | N |
T/R | 0.3329 | likely_benign | 0.3663 | ambiguous | -0.711 | Destabilizing | 0.942 | D | 0.613 | neutral | D | 0.524444769 | None | None | N |
T/S | 0.1075 | likely_benign | 0.1287 | benign | -1.304 | Destabilizing | 0.058 | N | 0.414 | neutral | N | 0.432742542 | None | None | N |
T/V | 0.1494 | likely_benign | 0.1792 | benign | -0.229 | Destabilizing | 0.559 | D | 0.424 | neutral | None | None | None | None | N |
T/W | 0.6885 | likely_pathogenic | 0.7502 | pathogenic | -0.714 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
T/Y | 0.3585 | ambiguous | 0.4136 | ambiguous | -0.367 | Destabilizing | 0.978 | D | 0.734 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.