Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27496 | 82711;82712;82713 | chr2:178563646;178563645;178563644 | chr2:179428373;179428372;179428371 |
N2AB | 25855 | 77788;77789;77790 | chr2:178563646;178563645;178563644 | chr2:179428373;179428372;179428371 |
N2A | 24928 | 75007;75008;75009 | chr2:178563646;178563645;178563644 | chr2:179428373;179428372;179428371 |
N2B | 18431 | 55516;55517;55518 | chr2:178563646;178563645;178563644 | chr2:179428373;179428372;179428371 |
Novex-1 | 18556 | 55891;55892;55893 | chr2:178563646;178563645;178563644 | chr2:179428373;179428372;179428371 |
Novex-2 | 18623 | 56092;56093;56094 | chr2:178563646;178563645;178563644 | chr2:179428373;179428372;179428371 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.896 | N | 0.671 | 0.397 | 0.418221603839 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
D/E | None | None | 0.9 | N | 0.509 | 0.313 | 0.323615622048 | gnomAD-4.0.0 | 6.84199E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99471E-07 | 0 | 0 |
D/G | rs1466312104 | None | 0.811 | D | 0.595 | 0.389 | 0.368183359018 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
D/N | rs554231442 | 0.061 | 0.06 | N | 0.169 | 0.143 | 0.238705975628 | gnomAD-2.1.1 | 4.78138E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 3.07503E-04 | None | 3.98667E-03 | None | 0 | 4.68E-05 | 0 |
D/N | rs554231442 | 0.061 | 0.06 | N | 0.169 | 0.143 | 0.238705975628 | gnomAD-3.1.2 | 2.49872E-04 | None | None | None | None | I | None | 2.41E-05 | 6.56E-05 | 0 | 0 | 7.74893E-04 | None | 0 | 0 | 5.88E-05 | 5.7947E-03 | 0 |
D/N | rs554231442 | 0.061 | 0.06 | N | 0.169 | 0.143 | 0.238705975628 | 1000 genomes | 9.98403E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 5.1E-03 | None |
D/N | rs554231442 | 0.061 | 0.06 | N | 0.169 | 0.143 | 0.238705975628 | gnomAD-4.0.0 | 2.85049E-04 | None | None | None | None | I | None | 1.33308E-05 | 1.66694E-05 | None | 0 | 1.33821E-04 | None | 0 | 8.2481E-04 | 5.84861E-05 | 4.04023E-03 | 1.60051E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5236 | ambiguous | 0.5152 | ambiguous | -0.141 | Destabilizing | 0.896 | D | 0.671 | neutral | N | 0.495197486 | None | None | I |
D/C | 0.8623 | likely_pathogenic | 0.8391 | pathogenic | 0.259 | Stabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | I |
D/E | 0.687 | likely_pathogenic | 0.6581 | pathogenic | -0.569 | Destabilizing | 0.9 | D | 0.509 | neutral | N | 0.502412734 | None | None | I |
D/F | 0.9198 | likely_pathogenic | 0.9123 | pathogenic | -0.415 | Destabilizing | 0.996 | D | 0.752 | deleterious | None | None | None | None | I |
D/G | 0.4678 | ambiguous | 0.4688 | ambiguous | -0.38 | Destabilizing | 0.811 | D | 0.595 | neutral | D | 0.525520646 | None | None | I |
D/H | 0.6645 | likely_pathogenic | 0.6364 | pathogenic | -0.761 | Destabilizing | 0.994 | D | 0.697 | prob.neutral | N | 0.50813718 | None | None | I |
D/I | 0.826 | likely_pathogenic | 0.7904 | pathogenic | 0.443 | Stabilizing | 0.988 | D | 0.753 | deleterious | None | None | None | None | I |
D/K | 0.8288 | likely_pathogenic | 0.8278 | pathogenic | 0.192 | Stabilizing | 0.919 | D | 0.601 | neutral | None | None | None | None | I |
D/L | 0.8057 | likely_pathogenic | 0.792 | pathogenic | 0.443 | Stabilizing | 0.988 | D | 0.738 | prob.delet. | None | None | None | None | I |
D/M | 0.9114 | likely_pathogenic | 0.9053 | pathogenic | 0.85 | Stabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
D/N | 0.1292 | likely_benign | 0.1155 | benign | -0.026 | Destabilizing | 0.06 | N | 0.169 | neutral | N | 0.502570774 | None | None | I |
D/P | 0.8853 | likely_pathogenic | 0.8901 | pathogenic | 0.273 | Stabilizing | 0.996 | D | 0.685 | prob.neutral | None | None | None | None | I |
D/Q | 0.8187 | likely_pathogenic | 0.8098 | pathogenic | 0.022 | Stabilizing | 0.988 | D | 0.639 | neutral | None | None | None | None | I |
D/R | 0.8173 | likely_pathogenic | 0.8085 | pathogenic | 0.083 | Stabilizing | 0.976 | D | 0.723 | prob.delet. | None | None | None | None | I |
D/S | 0.2338 | likely_benign | 0.2355 | benign | -0.152 | Destabilizing | 0.851 | D | 0.579 | neutral | None | None | None | None | I |
D/T | 0.4121 | ambiguous | 0.3945 | ambiguous | 0.034 | Stabilizing | 0.919 | D | 0.606 | neutral | None | None | None | None | I |
D/V | 0.6925 | likely_pathogenic | 0.6538 | pathogenic | 0.273 | Stabilizing | 0.984 | D | 0.747 | deleterious | N | 0.517669833 | None | None | I |
D/W | 0.9792 | likely_pathogenic | 0.9782 | pathogenic | -0.44 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
D/Y | 0.5733 | likely_pathogenic | 0.5517 | ambiguous | -0.213 | Destabilizing | 0.998 | D | 0.754 | deleterious | D | 0.548397841 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.