Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27499 | 82720;82721;82722 | chr2:178563637;178563636;178563635 | chr2:179428364;179428363;179428362 |
N2AB | 25858 | 77797;77798;77799 | chr2:178563637;178563636;178563635 | chr2:179428364;179428363;179428362 |
N2A | 24931 | 75016;75017;75018 | chr2:178563637;178563636;178563635 | chr2:179428364;179428363;179428362 |
N2B | 18434 | 55525;55526;55527 | chr2:178563637;178563636;178563635 | chr2:179428364;179428363;179428362 |
Novex-1 | 18559 | 55900;55901;55902 | chr2:178563637;178563636;178563635 | chr2:179428364;179428363;179428362 |
Novex-2 | 18626 | 56101;56102;56103 | chr2:178563637;178563636;178563635 | chr2:179428364;179428363;179428362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1366798233 | None | None | N | 0.273 | 0.091 | 0.134241683229 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1366798233 | None | None | N | 0.273 | 0.091 | 0.134241683229 | gnomAD-4.0.0 | 1.23941E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69524E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0521 | likely_benign | 0.0501 | benign | -0.586 | Destabilizing | None | N | 0.276 | neutral | N | 0.366213693 | None | None | I |
T/C | 0.2771 | likely_benign | 0.2905 | benign | -0.2 | Destabilizing | 0.041 | N | 0.599 | neutral | None | None | None | None | I |
T/D | 0.3608 | ambiguous | 0.3752 | ambiguous | -0.268 | Destabilizing | 0.001 | N | 0.408 | neutral | None | None | None | None | I |
T/E | 0.2876 | likely_benign | 0.3081 | benign | -0.325 | Destabilizing | 0.001 | N | 0.389 | neutral | None | None | None | None | I |
T/F | 0.2751 | likely_benign | 0.2985 | benign | -0.926 | Destabilizing | 0.008 | N | 0.546 | neutral | None | None | None | None | I |
T/G | 0.1596 | likely_benign | 0.1652 | benign | -0.77 | Destabilizing | None | N | 0.385 | neutral | None | None | None | None | I |
T/H | 0.2829 | likely_benign | 0.2864 | benign | -1.124 | Destabilizing | 0.116 | N | 0.615 | neutral | None | None | None | None | I |
T/I | 0.2059 | likely_benign | 0.2257 | benign | -0.205 | Destabilizing | 0.001 | N | 0.449 | neutral | N | 0.466455258 | None | None | I |
T/K | 0.2436 | likely_benign | 0.265 | benign | -0.554 | Destabilizing | 0.001 | N | 0.39 | neutral | None | None | None | None | I |
T/L | 0.1122 | likely_benign | 0.1256 | benign | -0.205 | Destabilizing | None | N | 0.346 | neutral | None | None | None | None | I |
T/M | 0.0891 | likely_benign | 0.0974 | benign | 0.239 | Stabilizing | 0.018 | N | 0.583 | neutral | None | None | None | None | I |
T/N | 0.1148 | likely_benign | 0.1158 | benign | -0.316 | Destabilizing | 0.001 | N | 0.428 | neutral | N | 0.459547928 | None | None | I |
T/P | 0.6825 | likely_pathogenic | 0.7171 | pathogenic | -0.302 | Destabilizing | None | N | 0.316 | neutral | N | 0.519500309 | None | None | I |
T/Q | 0.2523 | likely_benign | 0.2627 | benign | -0.614 | Destabilizing | 0.002 | N | 0.471 | neutral | None | None | None | None | I |
T/R | 0.2101 | likely_benign | 0.2256 | benign | -0.218 | Destabilizing | 0.002 | N | 0.469 | neutral | None | None | None | None | I |
T/S | 0.0728 | likely_benign | 0.0707 | benign | -0.533 | Destabilizing | None | N | 0.273 | neutral | N | 0.307626749 | None | None | I |
T/V | 0.1191 | likely_benign | 0.1255 | benign | -0.302 | Destabilizing | None | N | 0.313 | neutral | None | None | None | None | I |
T/W | 0.683 | likely_pathogenic | 0.7168 | pathogenic | -0.872 | Destabilizing | 0.316 | N | 0.619 | neutral | None | None | None | None | I |
T/Y | 0.3447 | ambiguous | 0.3571 | ambiguous | -0.626 | Destabilizing | 0.018 | N | 0.563 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.