Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27500 | 82723;82724;82725 | chr2:178563634;178563633;178563632 | chr2:179428361;179428360;179428359 |
N2AB | 25859 | 77800;77801;77802 | chr2:178563634;178563633;178563632 | chr2:179428361;179428360;179428359 |
N2A | 24932 | 75019;75020;75021 | chr2:178563634;178563633;178563632 | chr2:179428361;179428360;179428359 |
N2B | 18435 | 55528;55529;55530 | chr2:178563634;178563633;178563632 | chr2:179428361;179428360;179428359 |
Novex-1 | 18560 | 55903;55904;55905 | chr2:178563634;178563633;178563632 | chr2:179428361;179428360;179428359 |
Novex-2 | 18627 | 56104;56105;56106 | chr2:178563634;178563633;178563632 | chr2:179428361;179428360;179428359 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.001 | N | 0.281 | 0.246 | 0.226586394389 | gnomAD-4.0.0 | 1.59122E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.4108E-04 | 0 | 0 | 0 |
E/K | rs375422359 | 0.742 | 0.574 | N | 0.487 | 0.164 | None | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | I | None | 6.46E-05 | 8.69E-05 | None | 0 | 5.57E-05 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs375422359 | 0.742 | 0.574 | N | 0.487 | 0.164 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | I | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs375422359 | 0.742 | 0.574 | N | 0.487 | 0.164 | None | gnomAD-4.0.0 | 1.1155E-05 | None | None | None | None | I | None | 1.06843E-04 | 5.00233E-05 | None | 0 | 2.22946E-05 | None | 0 | 0 | 2.54286E-06 | 3.29352E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1086 | likely_benign | 0.1096 | benign | -0.24 | Destabilizing | 0.001 | N | 0.281 | neutral | N | 0.475634889 | None | None | I |
E/C | 0.7542 | likely_pathogenic | 0.7468 | pathogenic | 0.013 | Stabilizing | 0.944 | D | 0.536 | neutral | None | None | None | None | I |
E/D | 0.0906 | likely_benign | 0.0914 | benign | -0.25 | Destabilizing | 0.001 | N | 0.237 | neutral | N | 0.489121474 | None | None | I |
E/F | 0.7236 | likely_pathogenic | 0.7172 | pathogenic | -0.189 | Destabilizing | 0.818 | D | 0.518 | neutral | None | None | None | None | I |
E/G | 0.1348 | likely_benign | 0.1461 | benign | -0.421 | Destabilizing | 0.193 | N | 0.557 | neutral | N | 0.477462079 | None | None | I |
E/H | 0.3757 | ambiguous | 0.3975 | ambiguous | 0.099 | Stabilizing | 0.818 | D | 0.436 | neutral | None | None | None | None | I |
E/I | 0.3248 | likely_benign | 0.3016 | benign | 0.194 | Stabilizing | 0.69 | D | 0.539 | neutral | None | None | None | None | I |
E/K | 0.1163 | likely_benign | 0.1198 | benign | 0.398 | Stabilizing | 0.574 | D | 0.487 | neutral | N | 0.502050699 | None | None | I |
E/L | 0.353 | ambiguous | 0.3541 | ambiguous | 0.194 | Stabilizing | 0.241 | N | 0.506 | neutral | None | None | None | None | I |
E/M | 0.389 | ambiguous | 0.3859 | ambiguous | 0.217 | Stabilizing | 0.944 | D | 0.522 | neutral | None | None | None | None | I |
E/N | 0.1717 | likely_benign | 0.1785 | benign | 0.163 | Stabilizing | 0.388 | N | 0.443 | neutral | None | None | None | None | I |
E/P | 0.2257 | likely_benign | 0.2397 | benign | 0.07 | Stabilizing | 0.005 | N | 0.294 | neutral | None | None | None | None | I |
E/Q | 0.1195 | likely_benign | 0.128 | benign | 0.182 | Stabilizing | 0.016 | N | 0.264 | neutral | N | 0.509747462 | None | None | I |
E/R | 0.195 | likely_benign | 0.2074 | benign | 0.596 | Stabilizing | 0.527 | D | 0.429 | neutral | None | None | None | None | I |
E/S | 0.1487 | likely_benign | 0.1575 | benign | -0.018 | Destabilizing | 0.241 | N | 0.442 | neutral | None | None | None | None | I |
E/T | 0.1805 | likely_benign | 0.1836 | benign | 0.127 | Stabilizing | 0.388 | N | 0.528 | neutral | None | None | None | None | I |
E/V | 0.184 | likely_benign | 0.1709 | benign | 0.07 | Stabilizing | 0.193 | N | 0.507 | neutral | N | 0.492501687 | None | None | I |
E/W | 0.8646 | likely_pathogenic | 0.8722 | pathogenic | -0.076 | Destabilizing | 0.981 | D | 0.636 | neutral | None | None | None | None | I |
E/Y | 0.5685 | likely_pathogenic | 0.5671 | pathogenic | 0.052 | Stabilizing | 0.818 | D | 0.538 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.