Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27505 | 82738;82739;82740 | chr2:178563619;178563618;178563617 | chr2:179428346;179428345;179428344 |
N2AB | 25864 | 77815;77816;77817 | chr2:178563619;178563618;178563617 | chr2:179428346;179428345;179428344 |
N2A | 24937 | 75034;75035;75036 | chr2:178563619;178563618;178563617 | chr2:179428346;179428345;179428344 |
N2B | 18440 | 55543;55544;55545 | chr2:178563619;178563618;178563617 | chr2:179428346;179428345;179428344 |
Novex-1 | 18565 | 55918;55919;55920 | chr2:178563619;178563618;178563617 | chr2:179428346;179428345;179428344 |
Novex-2 | 18632 | 56119;56120;56121 | chr2:178563619;178563618;178563617 | chr2:179428346;179428345;179428344 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1270467286 | None | None | N | 0.283 | 0.052 | 0.244539031024 | gnomAD-4.0.0 | 3.60098E-06 | None | None | None | None | N | None | 1.26695E-04 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5624 | ambiguous | 0.584 | pathogenic | -2.279 | Highly Destabilizing | 0.157 | N | 0.674 | neutral | None | None | None | None | N |
I/C | 0.5927 | likely_pathogenic | 0.5903 | pathogenic | -1.324 | Destabilizing | 0.909 | D | 0.724 | prob.delet. | None | None | None | None | N |
I/D | 0.8634 | likely_pathogenic | 0.8576 | pathogenic | -2.315 | Highly Destabilizing | 0.726 | D | 0.767 | deleterious | None | None | None | None | N |
I/E | 0.8012 | likely_pathogenic | 0.7766 | pathogenic | -2.247 | Highly Destabilizing | 0.726 | D | 0.755 | deleterious | None | None | None | None | N |
I/F | 0.1193 | likely_benign | 0.1189 | benign | -1.514 | Destabilizing | 0.331 | N | 0.702 | prob.neutral | N | 0.467316633 | None | None | N |
I/G | 0.8077 | likely_pathogenic | 0.8187 | pathogenic | -2.674 | Highly Destabilizing | 0.726 | D | 0.743 | deleterious | None | None | None | None | N |
I/H | 0.3533 | ambiguous | 0.3291 | benign | -1.942 | Destabilizing | 0.832 | D | 0.777 | deleterious | None | None | None | None | N |
I/K | 0.5592 | ambiguous | 0.5073 | ambiguous | -1.82 | Destabilizing | 0.726 | D | 0.757 | deleterious | None | None | None | None | N |
I/L | 0.1089 | likely_benign | 0.1163 | benign | -1.209 | Destabilizing | 0.025 | N | 0.485 | neutral | N | 0.515150495 | None | None | N |
I/M | 0.1497 | likely_benign | 0.1528 | benign | -0.854 | Destabilizing | 0.497 | N | 0.719 | prob.delet. | N | 0.494575148 | None | None | N |
I/N | 0.362 | ambiguous | 0.3461 | ambiguous | -1.732 | Destabilizing | 0.667 | D | 0.78 | deleterious | N | 0.471796404 | None | None | N |
I/P | 0.9791 | likely_pathogenic | 0.9801 | pathogenic | -1.541 | Destabilizing | 0.89 | D | 0.782 | deleterious | None | None | None | None | N |
I/Q | 0.5332 | ambiguous | 0.5005 | ambiguous | -1.862 | Destabilizing | 0.726 | D | 0.788 | deleterious | None | None | None | None | N |
I/R | 0.3692 | ambiguous | 0.3318 | benign | -1.16 | Destabilizing | 0.726 | D | 0.785 | deleterious | None | None | None | None | N |
I/S | 0.3941 | ambiguous | 0.4086 | ambiguous | -2.314 | Highly Destabilizing | 0.497 | N | 0.716 | prob.delet. | N | 0.471187293 | None | None | N |
I/T | 0.364 | ambiguous | 0.361 | ambiguous | -2.139 | Highly Destabilizing | 0.124 | N | 0.713 | prob.delet. | N | 0.505645577 | None | None | N |
I/V | 0.0877 | likely_benign | 0.0859 | benign | -1.541 | Destabilizing | None | N | 0.283 | neutral | N | 0.454083394 | None | None | N |
I/W | 0.6057 | likely_pathogenic | 0.6215 | pathogenic | -1.736 | Destabilizing | 0.909 | D | 0.776 | deleterious | None | None | None | None | N |
I/Y | 0.3141 | likely_benign | 0.3141 | benign | -1.536 | Destabilizing | 0.003 | N | 0.531 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.