Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27508 | 82747;82748;82749 | chr2:178563610;178563609;178563608 | chr2:179428337;179428336;179428335 |
N2AB | 25867 | 77824;77825;77826 | chr2:178563610;178563609;178563608 | chr2:179428337;179428336;179428335 |
N2A | 24940 | 75043;75044;75045 | chr2:178563610;178563609;178563608 | chr2:179428337;179428336;179428335 |
N2B | 18443 | 55552;55553;55554 | chr2:178563610;178563609;178563608 | chr2:179428337;179428336;179428335 |
Novex-1 | 18568 | 55927;55928;55929 | chr2:178563610;178563609;178563608 | chr2:179428337;179428336;179428335 |
Novex-2 | 18635 | 56128;56129;56130 | chr2:178563610;178563609;178563608 | chr2:179428337;179428336;179428335 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs766900644 | -1.949 | 0.988 | D | 0.81 | 0.34 | 0.284539287134 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/N | rs766900644 | -1.949 | 0.988 | D | 0.81 | 0.34 | 0.284539287134 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs766900644 | -1.949 | 0.988 | D | 0.81 | 0.34 | 0.284539287134 | gnomAD-4.0.0 | 2.4789E-06 | None | None | None | None | N | None | 0 | 1.66744E-05 | None | 0 | 0 | None | 0 | 0 | 2.54287E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9779 | likely_pathogenic | 0.9761 | pathogenic | -1.353 | Destabilizing | 0.968 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/C | 0.9278 | likely_pathogenic | 0.924 | pathogenic | -1.373 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
K/D | 0.998 | likely_pathogenic | 0.9978 | pathogenic | -1.852 | Destabilizing | 0.995 | D | 0.836 | deleterious | None | None | None | None | N |
K/E | 0.9592 | likely_pathogenic | 0.9568 | pathogenic | -1.535 | Destabilizing | 0.958 | D | 0.679 | prob.neutral | N | 0.50874261 | None | None | N |
K/F | 0.9834 | likely_pathogenic | 0.9845 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
K/G | 0.9803 | likely_pathogenic | 0.9815 | pathogenic | -1.86 | Destabilizing | 0.991 | D | 0.792 | deleterious | None | None | None | None | N |
K/H | 0.8251 | likely_pathogenic | 0.8342 | pathogenic | -1.662 | Destabilizing | 0.999 | D | 0.828 | deleterious | None | None | None | None | N |
K/I | 0.9226 | likely_pathogenic | 0.907 | pathogenic | 0.091 | Stabilizing | 0.994 | D | 0.859 | deleterious | N | 0.513072982 | None | None | N |
K/L | 0.8605 | likely_pathogenic | 0.8499 | pathogenic | 0.091 | Stabilizing | 0.991 | D | 0.792 | deleterious | None | None | None | None | N |
K/M | 0.7415 | likely_pathogenic | 0.7117 | pathogenic | -0.239 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
K/N | 0.9883 | likely_pathogenic | 0.9873 | pathogenic | -1.838 | Destabilizing | 0.988 | D | 0.81 | deleterious | D | 0.531455221 | None | None | N |
K/P | 0.9993 | likely_pathogenic | 0.9992 | pathogenic | -0.369 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
K/Q | 0.6543 | likely_pathogenic | 0.6398 | pathogenic | -1.45 | Destabilizing | 0.988 | D | 0.813 | deleterious | N | 0.489321682 | None | None | N |
K/R | 0.113 | likely_benign | 0.1199 | benign | -0.875 | Destabilizing | 0.142 | N | 0.371 | neutral | N | 0.466628616 | None | None | N |
K/S | 0.9864 | likely_pathogenic | 0.9858 | pathogenic | -2.383 | Highly Destabilizing | 0.968 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/T | 0.9467 | likely_pathogenic | 0.9419 | pathogenic | -1.79 | Destabilizing | 0.988 | D | 0.804 | deleterious | N | 0.490852165 | None | None | N |
K/V | 0.897 | likely_pathogenic | 0.8799 | pathogenic | -0.369 | Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
K/W | 0.9671 | likely_pathogenic | 0.9744 | pathogenic | -0.641 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
K/Y | 0.9224 | likely_pathogenic | 0.9267 | pathogenic | -0.29 | Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.