Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2751 | 8476;8477;8478 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
N2AB | 2751 | 8476;8477;8478 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
N2A | 2751 | 8476;8477;8478 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
N2B | 2705 | 8338;8339;8340 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
Novex-1 | 2705 | 8338;8339;8340 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
Novex-2 | 2705 | 8338;8339;8340 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
Novex-3 | 2751 | 8476;8477;8478 | chr2:178770541;178770540;178770539 | chr2:179635268;179635267;179635266 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs368235451 | -0.086 | 0.024 | N | 0.335 | 0.241 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14863E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs368235451 | -0.086 | 0.024 | N | 0.335 | 0.241 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs368235451 | -0.086 | 0.024 | N | 0.335 | 0.241 | None | gnomAD-4.0.0 | 3.15978E-05 | None | None | None | None | N | None | 1.33461E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.15251E-05 | 0 | 1.60031E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.115 | likely_benign | 0.1339 | benign | -0.048 | Destabilizing | 0.024 | N | 0.377 | neutral | N | 0.486149861 | None | None | N |
E/C | 0.6486 | likely_pathogenic | 0.7491 | pathogenic | -0.216 | Destabilizing | 0.864 | D | 0.293 | neutral | None | None | None | None | N |
E/D | 0.0508 | likely_benign | 0.0551 | benign | -0.32 | Destabilizing | None | N | 0.116 | neutral | N | 0.333749287 | None | None | N |
E/F | 0.5953 | likely_pathogenic | 0.6807 | pathogenic | -0.101 | Destabilizing | 0.628 | D | 0.317 | neutral | None | None | None | None | N |
E/G | 0.0885 | likely_benign | 0.1047 | benign | -0.153 | Destabilizing | 0.024 | N | 0.335 | neutral | N | 0.497586807 | None | None | N |
E/H | 0.266 | likely_benign | 0.3264 | benign | 0.509 | Stabilizing | 0.356 | N | 0.297 | neutral | None | None | None | None | N |
E/I | 0.2758 | likely_benign | 0.3561 | ambiguous | 0.17 | Stabilizing | 0.356 | N | 0.361 | neutral | None | None | None | None | N |
E/K | 0.1135 | likely_benign | 0.1274 | benign | 0.369 | Stabilizing | 0.024 | N | 0.307 | neutral | N | 0.44169667 | None | None | N |
E/L | 0.2908 | likely_benign | 0.3694 | ambiguous | 0.17 | Stabilizing | 0.072 | N | 0.385 | neutral | None | None | None | None | N |
E/M | 0.3858 | ambiguous | 0.4675 | ambiguous | -0.035 | Destabilizing | 0.864 | D | 0.305 | neutral | None | None | None | None | N |
E/N | 0.0991 | likely_benign | 0.1175 | benign | 0.136 | Stabilizing | 0.016 | N | 0.303 | neutral | None | None | None | None | N |
E/P | 0.2591 | likely_benign | 0.3267 | benign | 0.115 | Stabilizing | 0.136 | N | 0.361 | neutral | None | None | None | None | N |
E/Q | 0.1228 | likely_benign | 0.1423 | benign | 0.147 | Stabilizing | 0.055 | N | 0.303 | neutral | N | 0.499506418 | None | None | N |
E/R | 0.1889 | likely_benign | 0.2145 | benign | 0.591 | Stabilizing | 0.072 | N | 0.306 | neutral | None | None | None | None | N |
E/S | 0.1005 | likely_benign | 0.1185 | benign | -0.001 | Destabilizing | 0.016 | N | 0.304 | neutral | None | None | None | None | N |
E/T | 0.1565 | likely_benign | 0.1916 | benign | 0.095 | Stabilizing | 0.072 | N | 0.351 | neutral | None | None | None | None | N |
E/V | 0.1783 | likely_benign | 0.2259 | benign | 0.115 | Stabilizing | 0.106 | N | 0.407 | neutral | N | 0.514371176 | None | None | N |
E/W | 0.7525 | likely_pathogenic | 0.8142 | pathogenic | -0.061 | Destabilizing | 0.864 | D | 0.317 | neutral | None | None | None | None | N |
E/Y | 0.4046 | ambiguous | 0.4768 | ambiguous | 0.115 | Stabilizing | 0.628 | D | 0.323 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.