Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27512 | 82759;82760;82761 | chr2:178563598;178563597;178563596 | chr2:179428325;179428324;179428323 |
N2AB | 25871 | 77836;77837;77838 | chr2:178563598;178563597;178563596 | chr2:179428325;179428324;179428323 |
N2A | 24944 | 75055;75056;75057 | chr2:178563598;178563597;178563596 | chr2:179428325;179428324;179428323 |
N2B | 18447 | 55564;55565;55566 | chr2:178563598;178563597;178563596 | chr2:179428325;179428324;179428323 |
Novex-1 | 18572 | 55939;55940;55941 | chr2:178563598;178563597;178563596 | chr2:179428325;179428324;179428323 |
Novex-2 | 18639 | 56140;56141;56142 | chr2:178563598;178563597;178563596 | chr2:179428325;179428324;179428323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.001 | N | 0.265 | 0.128 | 0.246215685461 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
E/K | None | None | 0.175 | N | 0.309 | 0.166 | 0.249502417897 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1402 | likely_benign | 0.1496 | benign | -0.153 | Destabilizing | 0.001 | N | 0.265 | neutral | N | 0.489044116 | None | None | N |
E/C | 0.8175 | likely_pathogenic | 0.8224 | pathogenic | -0.143 | Destabilizing | 0.883 | D | 0.241 | neutral | None | None | None | None | N |
E/D | 0.088 | likely_benign | 0.1015 | benign | -0.054 | Destabilizing | None | N | 0.183 | neutral | N | 0.414698286 | None | None | N |
E/F | 0.7569 | likely_pathogenic | 0.7586 | pathogenic | -0.212 | Destabilizing | 0.667 | D | 0.266 | neutral | None | None | None | None | N |
E/G | 0.1612 | likely_benign | 0.1883 | benign | -0.277 | Destabilizing | None | N | 0.229 | neutral | N | 0.434668127 | None | None | N |
E/H | 0.4991 | ambiguous | 0.5095 | ambiguous | 0.318 | Stabilizing | 0.859 | D | 0.264 | neutral | None | None | None | None | N |
E/I | 0.4644 | ambiguous | 0.4294 | ambiguous | 0.122 | Stabilizing | 0.497 | N | 0.313 | neutral | None | None | None | None | N |
E/K | 0.2645 | likely_benign | 0.2687 | benign | 0.266 | Stabilizing | 0.175 | N | 0.309 | neutral | N | 0.428457017 | None | None | N |
E/L | 0.4183 | ambiguous | 0.4382 | ambiguous | 0.122 | Stabilizing | 0.124 | N | 0.329 | neutral | None | None | None | None | N |
E/M | 0.5014 | ambiguous | 0.4887 | ambiguous | -0.016 | Destabilizing | 0.958 | D | 0.259 | neutral | None | None | None | None | N |
E/N | 0.2242 | likely_benign | 0.24 | benign | 0.229 | Stabilizing | 0.124 | N | 0.281 | neutral | None | None | None | None | N |
E/P | 0.7774 | likely_pathogenic | 0.8087 | pathogenic | 0.048 | Stabilizing | 0.364 | N | 0.334 | neutral | None | None | None | None | N |
E/Q | 0.2007 | likely_benign | 0.2054 | benign | 0.23 | Stabilizing | 0.175 | N | 0.303 | neutral | N | 0.505859008 | None | None | N |
E/R | 0.3654 | ambiguous | 0.3779 | ambiguous | 0.512 | Stabilizing | 0.497 | N | 0.275 | neutral | None | None | None | None | N |
E/S | 0.1763 | likely_benign | 0.1957 | benign | -0.005 | Destabilizing | 0.055 | N | 0.339 | neutral | None | None | None | None | N |
E/T | 0.2063 | likely_benign | 0.2064 | benign | 0.095 | Stabilizing | 0.001 | N | 0.295 | neutral | None | None | None | None | N |
E/V | 0.2591 | likely_benign | 0.2504 | benign | 0.048 | Stabilizing | 0.096 | N | 0.335 | neutral | N | 0.49972247 | None | None | N |
E/W | 0.8799 | likely_pathogenic | 0.8863 | pathogenic | -0.156 | Destabilizing | 0.958 | D | 0.286 | neutral | None | None | None | None | N |
E/Y | 0.5743 | likely_pathogenic | 0.5762 | pathogenic | 0.007 | Stabilizing | 0.859 | D | 0.28 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.