Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27520 | 82783;82784;82785 | chr2:178563574;178563573;178563572 | chr2:179428301;179428300;179428299 |
N2AB | 25879 | 77860;77861;77862 | chr2:178563574;178563573;178563572 | chr2:179428301;179428300;179428299 |
N2A | 24952 | 75079;75080;75081 | chr2:178563574;178563573;178563572 | chr2:179428301;179428300;179428299 |
N2B | 18455 | 55588;55589;55590 | chr2:178563574;178563573;178563572 | chr2:179428301;179428300;179428299 |
Novex-1 | 18580 | 55963;55964;55965 | chr2:178563574;178563573;178563572 | chr2:179428301;179428300;179428299 |
Novex-2 | 18647 | 56164;56165;56166 | chr2:178563574;178563573;178563572 | chr2:179428301;179428300;179428299 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.999 | N | 0.603 | 0.464 | 0.439445477881 | gnomAD-4.0.0 | 1.36842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 1.65656E-05 |
N/K | rs56264840 | -0.273 | 1.0 | N | 0.714 | 0.423 | 0.250039746154 | gnomAD-2.1.1 | 3.30797E-03 | None | None | None | None | N | None | 1.23967E-04 | 8.19858E-04 | None | 1.0628E-03 | 0 | None | 2.0979E-02 | None | 4E-05 | 1.71805E-03 | 2.94283E-03 |
N/K | rs56264840 | -0.273 | 1.0 | N | 0.714 | 0.423 | 0.250039746154 | gnomAD-3.1.2 | 1.72212E-03 | None | None | None | None | N | None | 1.68952E-04 | 1.7038E-03 | 0 | 8.64553E-04 | 0 | None | 0 | 0 | 1.67593E-03 | 2.25673E-02 | 1.43267E-03 |
N/K | rs56264840 | -0.273 | 1.0 | N | 0.714 | 0.423 | 0.250039746154 | 1000 genomes | 5.79073E-03 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 2E-03 | None | None | None | 2.66E-02 | None |
N/K | rs56264840 | -0.273 | 1.0 | N | 0.714 | 0.423 | 0.250039746154 | gnomAD-4.0.0 | 2.11365E-03 | None | None | None | None | N | None | 2.39955E-04 | 9.83301E-04 | None | 8.44595E-04 | 4.45911E-05 | None | 6.24766E-05 | 4.12541E-03 | 1.06462E-03 | 2.03878E-02 | 2.64068E-03 |
N/S | None | None | 0.999 | N | 0.567 | 0.253 | 0.278143212241 | gnomAD-4.0.0 | 2.05263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51978E-05 | None | 0 | 0 | 0 | 0 | 3.31312E-05 |
N/T | None | None | 0.999 | N | 0.677 | 0.246 | 0.315903272564 | gnomAD-4.0.0 | 6.84209E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65656E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4883 | ambiguous | 0.4955 | ambiguous | -0.883 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
N/C | 0.3161 | likely_benign | 0.3112 | benign | -0.027 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/D | 0.5572 | ambiguous | 0.5325 | ambiguous | -0.383 | Destabilizing | 0.999 | D | 0.603 | neutral | N | 0.488525215 | None | None | N |
N/E | 0.8803 | likely_pathogenic | 0.8857 | pathogenic | -0.267 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
N/F | 0.8222 | likely_pathogenic | 0.8086 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
N/G | 0.4107 | ambiguous | 0.406 | ambiguous | -1.24 | Destabilizing | 0.999 | D | 0.561 | neutral | None | None | None | None | N |
N/H | 0.191 | likely_benign | 0.1871 | benign | -0.919 | Destabilizing | 1.0 | D | 0.755 | deleterious | N | 0.520599174 | None | None | N |
N/I | 0.506 | ambiguous | 0.5167 | ambiguous | 0.034 | Stabilizing | 1.0 | D | 0.792 | deleterious | N | 0.483512012 | None | None | N |
N/K | 0.8527 | likely_pathogenic | 0.8649 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | N | 0.492715497 | None | None | N |
N/L | 0.4265 | ambiguous | 0.4511 | ambiguous | 0.034 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
N/M | 0.5921 | likely_pathogenic | 0.5971 | pathogenic | 0.398 | Stabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
N/P | 0.8223 | likely_pathogenic | 0.8545 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
N/Q | 0.6861 | likely_pathogenic | 0.6959 | pathogenic | -0.777 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
N/R | 0.7921 | likely_pathogenic | 0.8129 | pathogenic | -0.316 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
N/S | 0.0809 | likely_benign | 0.0849 | benign | -0.908 | Destabilizing | 0.999 | D | 0.567 | neutral | N | 0.499413038 | None | None | N |
N/T | 0.1701 | likely_benign | 0.1753 | benign | -0.587 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.492967069 | None | None | N |
N/V | 0.4504 | ambiguous | 0.4545 | ambiguous | -0.241 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/W | 0.9142 | likely_pathogenic | 0.9157 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
N/Y | 0.4693 | ambiguous | 0.4603 | ambiguous | -0.124 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.523812838 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.