Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27521 | 82786;82787;82788 | chr2:178563571;178563570;178563569 | chr2:179428298;179428297;179428296 |
N2AB | 25880 | 77863;77864;77865 | chr2:178563571;178563570;178563569 | chr2:179428298;179428297;179428296 |
N2A | 24953 | 75082;75083;75084 | chr2:178563571;178563570;178563569 | chr2:179428298;179428297;179428296 |
N2B | 18456 | 55591;55592;55593 | chr2:178563571;178563570;178563569 | chr2:179428298;179428297;179428296 |
Novex-1 | 18581 | 55966;55967;55968 | chr2:178563571;178563570;178563569 | chr2:179428298;179428297;179428296 |
Novex-2 | 18648 | 56167;56168;56169 | chr2:178563571;178563570;178563569 | chr2:179428298;179428297;179428296 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1060500417 | 0.064 | 0.999 | N | 0.644 | 0.277 | 0.332133492242 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
K/E | rs1060500417 | 0.064 | 0.999 | N | 0.644 | 0.277 | 0.332133492242 | gnomAD-4.0.0 | 3.18249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71677E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8965 | likely_pathogenic | 0.8881 | pathogenic | 0.069 | Stabilizing | 0.999 | D | 0.63 | neutral | None | None | None | None | N |
K/C | 0.9381 | likely_pathogenic | 0.9387 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/D | 0.9644 | likely_pathogenic | 0.96 | pathogenic | -0.196 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/E | 0.8486 | likely_pathogenic | 0.8433 | pathogenic | -0.208 | Destabilizing | 0.999 | D | 0.644 | neutral | N | 0.484347585 | None | None | N |
K/F | 0.9829 | likely_pathogenic | 0.9822 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
K/G | 0.8322 | likely_pathogenic | 0.8233 | pathogenic | -0.067 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/H | 0.6786 | likely_pathogenic | 0.6869 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
K/I | 0.9197 | likely_pathogenic | 0.9102 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/L | 0.8724 | likely_pathogenic | 0.8648 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/M | 0.8444 | likely_pathogenic | 0.8304 | pathogenic | -0.014 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.475065314 | None | None | N |
K/N | 0.9447 | likely_pathogenic | 0.9362 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.752 | deleterious | N | 0.466302675 | None | None | N |
K/P | 0.9163 | likely_pathogenic | 0.9119 | pathogenic | 0.275 | Stabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | N |
K/Q | 0.4689 | ambiguous | 0.4696 | ambiguous | 0.024 | Stabilizing | 1.0 | D | 0.749 | deleterious | N | 0.470038885 | None | None | N |
K/R | 0.075 | likely_benign | 0.0769 | benign | -0.022 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.481480639 | None | None | N |
K/S | 0.9136 | likely_pathogenic | 0.9004 | pathogenic | -0.197 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/T | 0.7934 | likely_pathogenic | 0.7782 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.672 | neutral | N | 0.472322438 | None | None | N |
K/V | 0.8885 | likely_pathogenic | 0.8779 | pathogenic | 0.275 | Stabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
K/W | 0.9268 | likely_pathogenic | 0.9317 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/Y | 0.9283 | likely_pathogenic | 0.9217 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.