Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27527 | 82804;82805;82806 | chr2:178563553;178563552;178563551 | chr2:179428280;179428279;179428278 |
N2AB | 25886 | 77881;77882;77883 | chr2:178563553;178563552;178563551 | chr2:179428280;179428279;179428278 |
N2A | 24959 | 75100;75101;75102 | chr2:178563553;178563552;178563551 | chr2:179428280;179428279;179428278 |
N2B | 18462 | 55609;55610;55611 | chr2:178563553;178563552;178563551 | chr2:179428280;179428279;179428278 |
Novex-1 | 18587 | 55984;55985;55986 | chr2:178563553;178563552;178563551 | chr2:179428280;179428279;179428278 |
Novex-2 | 18654 | 56185;56186;56187 | chr2:178563553;178563552;178563551 | chr2:179428280;179428279;179428278 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs202169004 | -0.983 | 1.0 | N | 0.815 | 0.427 | 0.787995792498 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
L/P | rs202169004 | -0.983 | 1.0 | N | 0.815 | 0.427 | 0.787995792498 | gnomAD-4.0.0 | 1.43215E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.28671E-05 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5611 | ambiguous | 0.5264 | ambiguous | -2.015 | Highly Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
L/C | 0.5717 | likely_pathogenic | 0.5521 | ambiguous | -1.143 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/D | 0.9127 | likely_pathogenic | 0.9042 | pathogenic | -1.928 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
L/E | 0.6954 | likely_pathogenic | 0.6676 | pathogenic | -1.754 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
L/F | 0.4418 | ambiguous | 0.4218 | ambiguous | -1.187 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/G | 0.7114 | likely_pathogenic | 0.709 | pathogenic | -2.484 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
L/H | 0.5221 | ambiguous | 0.4973 | ambiguous | -1.672 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
L/I | 0.2258 | likely_benign | 0.1997 | benign | -0.699 | Destabilizing | 0.999 | D | 0.501 | neutral | None | None | None | None | N |
L/K | 0.4782 | ambiguous | 0.4333 | ambiguous | -1.427 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
L/M | 0.1921 | likely_benign | 0.1765 | benign | -0.564 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.521903109 | None | None | N |
L/N | 0.4925 | ambiguous | 0.4972 | ambiguous | -1.651 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
L/P | 0.6602 | likely_pathogenic | 0.6209 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.499930327 | None | None | N |
L/Q | 0.3041 | likely_benign | 0.2828 | benign | -1.6 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.48354433 | None | None | N |
L/R | 0.3054 | likely_benign | 0.285 | benign | -1.06 | Destabilizing | 1.0 | D | 0.796 | deleterious | N | 0.502738558 | None | None | N |
L/S | 0.5747 | likely_pathogenic | 0.5625 | ambiguous | -2.321 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
L/T | 0.2197 | likely_benign | 0.2027 | benign | -2.007 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
L/V | 0.1744 | likely_benign | 0.1574 | benign | -1.115 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.483037351 | None | None | N |
L/W | 0.6595 | likely_pathogenic | 0.6376 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/Y | 0.7142 | likely_pathogenic | 0.6883 | pathogenic | -1.134 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.