Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2752782804;82805;82806 chr2:178563553;178563552;178563551chr2:179428280;179428279;179428278
N2AB2588677881;77882;77883 chr2:178563553;178563552;178563551chr2:179428280;179428279;179428278
N2A2495975100;75101;75102 chr2:178563553;178563552;178563551chr2:179428280;179428279;179428278
N2B1846255609;55610;55611 chr2:178563553;178563552;178563551chr2:179428280;179428279;179428278
Novex-11858755984;55985;55986 chr2:178563553;178563552;178563551chr2:179428280;179428279;179428278
Novex-21865456185;56186;56187 chr2:178563553;178563552;178563551chr2:179428280;179428279;179428278
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Fn3-88
  • Domain position: 59
  • Structural Position: 89
  • Q(SASA): 0.2999
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs202169004 -0.983 1.0 N 0.815 0.427 0.787995792498 gnomAD-2.1.1 4.02E-06 None None None None N None 0 0 None 0 0 None 3.27E-05 None 0 0 0
L/P rs202169004 -0.983 1.0 N 0.815 0.427 0.787995792498 gnomAD-4.0.0 1.43215E-05 None None None None N None 0 0 None 0 0 None 0 0 2.28671E-05 1.43271E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.5611 ambiguous 0.5264 ambiguous -2.015 Highly Destabilizing 0.999 D 0.657 neutral None None None None N
L/C 0.5717 likely_pathogenic 0.5521 ambiguous -1.143 Destabilizing 1.0 D 0.757 deleterious None None None None N
L/D 0.9127 likely_pathogenic 0.9042 pathogenic -1.928 Destabilizing 1.0 D 0.815 deleterious None None None None N
L/E 0.6954 likely_pathogenic 0.6676 pathogenic -1.754 Destabilizing 1.0 D 0.81 deleterious None None None None N
L/F 0.4418 ambiguous 0.4218 ambiguous -1.187 Destabilizing 1.0 D 0.721 prob.delet. None None None None N
L/G 0.7114 likely_pathogenic 0.709 pathogenic -2.484 Highly Destabilizing 1.0 D 0.802 deleterious None None None None N
L/H 0.5221 ambiguous 0.4973 ambiguous -1.672 Destabilizing 1.0 D 0.809 deleterious None None None None N
L/I 0.2258 likely_benign 0.1997 benign -0.699 Destabilizing 0.999 D 0.501 neutral None None None None N
L/K 0.4782 ambiguous 0.4333 ambiguous -1.427 Destabilizing 1.0 D 0.753 deleterious None None None None N
L/M 0.1921 likely_benign 0.1765 benign -0.564 Destabilizing 1.0 D 0.701 prob.neutral N 0.521903109 None None N
L/N 0.4925 ambiguous 0.4972 ambiguous -1.651 Destabilizing 1.0 D 0.817 deleterious None None None None N
L/P 0.6602 likely_pathogenic 0.6209 pathogenic -1.115 Destabilizing 1.0 D 0.815 deleterious N 0.499930327 None None N
L/Q 0.3041 likely_benign 0.2828 benign -1.6 Destabilizing 1.0 D 0.797 deleterious N 0.48354433 None None N
L/R 0.3054 likely_benign 0.285 benign -1.06 Destabilizing 1.0 D 0.796 deleterious N 0.502738558 None None N
L/S 0.5747 likely_pathogenic 0.5625 ambiguous -2.321 Highly Destabilizing 1.0 D 0.753 deleterious None None None None N
L/T 0.2197 likely_benign 0.2027 benign -2.007 Highly Destabilizing 1.0 D 0.76 deleterious None None None None N
L/V 0.1744 likely_benign 0.1574 benign -1.115 Destabilizing 0.999 D 0.555 neutral N 0.483037351 None None N
L/W 0.6595 likely_pathogenic 0.6376 pathogenic -1.457 Destabilizing 1.0 D 0.791 deleterious None None None None N
L/Y 0.7142 likely_pathogenic 0.6883 pathogenic -1.134 Destabilizing 1.0 D 0.782 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.