Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27535 | 82828;82829;82830 | chr2:178563529;178563528;178563527 | chr2:179428256;179428255;179428254 |
N2AB | 25894 | 77905;77906;77907 | chr2:178563529;178563528;178563527 | chr2:179428256;179428255;179428254 |
N2A | 24967 | 75124;75125;75126 | chr2:178563529;178563528;178563527 | chr2:179428256;179428255;179428254 |
N2B | 18470 | 55633;55634;55635 | chr2:178563529;178563528;178563527 | chr2:179428256;179428255;179428254 |
Novex-1 | 18595 | 56008;56009;56010 | chr2:178563529;178563528;178563527 | chr2:179428256;179428255;179428254 |
Novex-2 | 18662 | 56209;56210;56211 | chr2:178563529;178563528;178563527 | chr2:179428256;179428255;179428254 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs775733174 | -0.978 | 0.822 | N | 0.437 | 0.185 | 0.239901079897 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
T/A | rs775733174 | -0.978 | 0.822 | N | 0.437 | 0.185 | 0.239901079897 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99471E-07 | 1.15934E-05 | 0 |
T/I | None | None | 0.89 | N | 0.509 | 0.258 | 0.325533332567 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0861 | likely_benign | 0.0869 | benign | -0.895 | Destabilizing | 0.822 | D | 0.437 | neutral | N | 0.490044194 | None | None | N |
T/C | 0.3866 | ambiguous | 0.4037 | ambiguous | -0.423 | Destabilizing | 0.998 | D | 0.588 | neutral | None | None | None | None | N |
T/D | 0.6291 | likely_pathogenic | 0.6241 | pathogenic | -0.177 | Destabilizing | 0.993 | D | 0.581 | neutral | None | None | None | None | N |
T/E | 0.4331 | ambiguous | 0.4412 | ambiguous | -0.168 | Destabilizing | 0.978 | D | 0.531 | neutral | None | None | None | None | N |
T/F | 0.2636 | likely_benign | 0.2729 | benign | -0.933 | Destabilizing | 0.915 | D | 0.595 | neutral | None | None | None | None | N |
T/G | 0.2676 | likely_benign | 0.2779 | benign | -1.164 | Destabilizing | 0.978 | D | 0.533 | neutral | None | None | None | None | N |
T/H | 0.3103 | likely_benign | 0.3126 | benign | -1.323 | Destabilizing | 0.988 | D | 0.651 | neutral | None | None | None | None | N |
T/I | 0.118 | likely_benign | 0.1188 | benign | -0.266 | Destabilizing | 0.89 | D | 0.509 | neutral | N | 0.460300077 | None | None | N |
T/K | 0.2804 | likely_benign | 0.2801 | benign | -0.739 | Destabilizing | 0.978 | D | 0.528 | neutral | None | None | None | None | N |
T/L | 0.0658 | likely_benign | 0.0705 | benign | -0.266 | Destabilizing | 0.559 | D | 0.465 | neutral | None | None | None | None | N |
T/M | 0.0721 | likely_benign | 0.0724 | benign | -0.013 | Destabilizing | 0.559 | D | 0.359 | neutral | None | None | None | None | N |
T/N | 0.1621 | likely_benign | 0.1588 | benign | -0.656 | Destabilizing | 0.97 | D | 0.531 | neutral | N | 0.508168595 | None | None | N |
T/P | 0.2197 | likely_benign | 0.2571 | benign | -0.444 | Destabilizing | 0.99 | D | 0.588 | neutral | D | 0.523407406 | None | None | N |
T/Q | 0.2452 | likely_benign | 0.2443 | benign | -0.769 | Destabilizing | 0.978 | D | 0.589 | neutral | None | None | None | None | N |
T/R | 0.2301 | likely_benign | 0.2343 | benign | -0.483 | Destabilizing | 0.978 | D | 0.585 | neutral | None | None | None | None | N |
T/S | 0.1248 | likely_benign | 0.1334 | benign | -0.948 | Destabilizing | 0.904 | D | 0.436 | neutral | N | 0.457451773 | None | None | N |
T/V | 0.0971 | likely_benign | 0.0953 | benign | -0.444 | Destabilizing | 0.754 | D | 0.42 | neutral | None | None | None | None | N |
T/W | 0.5633 | ambiguous | 0.5963 | pathogenic | -0.885 | Destabilizing | 0.994 | D | 0.647 | neutral | None | None | None | None | N |
T/Y | 0.3483 | ambiguous | 0.3619 | ambiguous | -0.666 | Destabilizing | 0.043 | N | 0.309 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.