Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27536 | 82831;82832;82833 | chr2:178563526;178563525;178563524 | chr2:179428253;179428252;179428251 |
N2AB | 25895 | 77908;77909;77910 | chr2:178563526;178563525;178563524 | chr2:179428253;179428252;179428251 |
N2A | 24968 | 75127;75128;75129 | chr2:178563526;178563525;178563524 | chr2:179428253;179428252;179428251 |
N2B | 18471 | 55636;55637;55638 | chr2:178563526;178563525;178563524 | chr2:179428253;179428252;179428251 |
Novex-1 | 18596 | 56011;56012;56013 | chr2:178563526;178563525;178563524 | chr2:179428253;179428252;179428251 |
Novex-2 | 18663 | 56212;56213;56214 | chr2:178563526;178563525;178563524 | chr2:179428253;179428252;179428251 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs745974517 | 0.062 | 0.989 | N | 0.58 | 0.339 | 0.383590876969 | gnomAD-2.1.1 | 3.62E-05 | None | None | None | None | N | None | 1.29182E-04 | 0 | None | 0 | 2.22941E-04 | None | 3.27E-05 | None | 4.64E-05 | 8.88E-06 | 0 |
E/K | rs745974517 | 0.062 | 0.989 | N | 0.58 | 0.339 | 0.383590876969 | gnomAD-4.0.0 | 1.09474E-05 | None | None | None | None | N | None | 5.97693E-05 | 0 | None | 0 | 1.00806E-04 | None | 1.87259E-05 | 1.7343E-04 | 3.59789E-06 | 2.31868E-05 | 3.31345E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1492 | likely_benign | 0.1635 | benign | -0.474 | Destabilizing | 0.939 | D | 0.535 | neutral | N | 0.476506892 | None | None | N |
E/C | 0.8616 | likely_pathogenic | 0.8814 | pathogenic | 0.029 | Stabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/D | 0.1417 | likely_benign | 0.2139 | benign | -0.645 | Destabilizing | 0.02 | N | 0.147 | neutral | N | 0.496349574 | None | None | N |
E/F | 0.8675 | likely_pathogenic | 0.8933 | pathogenic | -0.571 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/G | 0.2578 | likely_benign | 0.3092 | benign | -0.704 | Destabilizing | 0.939 | D | 0.541 | neutral | N | 0.507959369 | None | None | N |
E/H | 0.5794 | likely_pathogenic | 0.6397 | pathogenic | -0.702 | Destabilizing | 0.999 | D | 0.592 | neutral | None | None | None | None | N |
E/I | 0.514 | ambiguous | 0.5074 | ambiguous | 0.104 | Stabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/K | 0.2295 | likely_benign | 0.263 | benign | -0.005 | Destabilizing | 0.989 | D | 0.58 | neutral | N | 0.486777241 | None | None | N |
E/L | 0.5742 | likely_pathogenic | 0.6168 | pathogenic | 0.104 | Stabilizing | 0.993 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/M | 0.6234 | likely_pathogenic | 0.6268 | pathogenic | 0.455 | Stabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
E/N | 0.3137 | likely_benign | 0.3678 | ambiguous | -0.173 | Destabilizing | 0.973 | D | 0.597 | neutral | None | None | None | None | N |
E/P | 0.3413 | ambiguous | 0.3679 | ambiguous | -0.067 | Destabilizing | 0.993 | D | 0.583 | neutral | None | None | None | None | N |
E/Q | 0.1962 | likely_benign | 0.2025 | benign | -0.159 | Destabilizing | 0.996 | D | 0.629 | neutral | N | 0.482093207 | None | None | N |
E/R | 0.351 | ambiguous | 0.3881 | ambiguous | 0.086 | Stabilizing | 0.993 | D | 0.613 | neutral | None | None | None | None | N |
E/S | 0.2219 | likely_benign | 0.2537 | benign | -0.382 | Destabilizing | 0.953 | D | 0.561 | neutral | None | None | None | None | N |
E/T | 0.312 | likely_benign | 0.3245 | benign | -0.21 | Destabilizing | 0.986 | D | 0.553 | neutral | None | None | None | None | N |
E/V | 0.2973 | likely_benign | 0.2977 | benign | -0.067 | Destabilizing | 0.991 | D | 0.628 | neutral | N | 0.496349574 | None | None | N |
E/W | 0.95 | likely_pathogenic | 0.9627 | pathogenic | -0.504 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Y | 0.7544 | likely_pathogenic | 0.808 | pathogenic | -0.356 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.