Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27542 | 82849;82850;82851 | chr2:178563508;178563507;178563506 | chr2:179428235;179428234;179428233 |
N2AB | 25901 | 77926;77927;77928 | chr2:178563508;178563507;178563506 | chr2:179428235;179428234;179428233 |
N2A | 24974 | 75145;75146;75147 | chr2:178563508;178563507;178563506 | chr2:179428235;179428234;179428233 |
N2B | 18477 | 55654;55655;55656 | chr2:178563508;178563507;178563506 | chr2:179428235;179428234;179428233 |
Novex-1 | 18602 | 56029;56030;56031 | chr2:178563508;178563507;178563506 | chr2:179428235;179428234;179428233 |
Novex-2 | 18669 | 56230;56231;56232 | chr2:178563508;178563507;178563506 | chr2:179428235;179428234;179428233 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | rs1704452293 | None | 0.565 | N | 0.731 | 0.472 | 0.504480301252 | gnomAD-4.0.0 | 2.05262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9947E-07 | 0 | 3.31334E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9977 | likely_pathogenic | 0.998 | pathogenic | -2.901 | Highly Destabilizing | 0.775 | D | 0.833 | deleterious | None | None | None | None | N |
F/C | 0.9705 | likely_pathogenic | 0.9721 | pathogenic | -1.526 | Destabilizing | 0.995 | D | 0.834 | deleterious | D | 0.548619013 | None | None | N |
F/D | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -3.772 | Highly Destabilizing | 0.987 | D | 0.857 | deleterious | None | None | None | None | N |
F/E | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -3.529 | Highly Destabilizing | 0.961 | D | 0.859 | deleterious | None | None | None | None | N |
F/G | 0.9967 | likely_pathogenic | 0.9977 | pathogenic | -3.358 | Highly Destabilizing | 0.961 | D | 0.837 | deleterious | None | None | None | None | N |
F/H | 0.9886 | likely_pathogenic | 0.9917 | pathogenic | -2.311 | Highly Destabilizing | 0.923 | D | 0.788 | deleterious | None | None | None | None | N |
F/I | 0.9605 | likely_pathogenic | 0.9468 | pathogenic | -1.378 | Destabilizing | 0.565 | D | 0.731 | prob.delet. | N | 0.506010813 | None | None | N |
F/K | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -2.339 | Highly Destabilizing | 0.923 | D | 0.861 | deleterious | None | None | None | None | N |
F/L | 0.9938 | likely_pathogenic | 0.992 | pathogenic | -1.378 | Destabilizing | 0.008 | N | 0.354 | neutral | N | 0.505632419 | None | None | N |
F/M | 0.9781 | likely_pathogenic | 0.9736 | pathogenic | -0.987 | Destabilizing | 0.923 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/N | 0.9947 | likely_pathogenic | 0.9963 | pathogenic | -3.047 | Highly Destabilizing | 0.961 | D | 0.865 | deleterious | None | None | None | None | N |
F/P | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.903 | Destabilizing | 0.987 | D | 0.877 | deleterious | None | None | None | None | N |
F/Q | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -2.87 | Highly Destabilizing | 0.961 | D | 0.869 | deleterious | None | None | None | None | N |
F/R | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -2.1 | Highly Destabilizing | 0.961 | D | 0.867 | deleterious | None | None | None | None | N |
F/S | 0.9964 | likely_pathogenic | 0.9975 | pathogenic | -3.465 | Highly Destabilizing | 0.901 | D | 0.832 | deleterious | D | 0.548619013 | None | None | N |
F/T | 0.9981 | likely_pathogenic | 0.9984 | pathogenic | -3.1 | Highly Destabilizing | 0.923 | D | 0.837 | deleterious | None | None | None | None | N |
F/V | 0.9659 | likely_pathogenic | 0.9604 | pathogenic | -1.903 | Destabilizing | 0.565 | D | 0.803 | deleterious | N | 0.473077078 | None | None | N |
F/W | 0.8608 | likely_pathogenic | 0.8795 | pathogenic | -0.645 | Destabilizing | 0.989 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/Y | 0.222 | likely_benign | 0.2849 | benign | -1.083 | Destabilizing | 0.008 | N | 0.287 | neutral | N | 0.489088781 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.