Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27543 | 82852;82853;82854 | chr2:178563505;178563504;178563503 | chr2:179428232;179428231;179428230 |
N2AB | 25902 | 77929;77930;77931 | chr2:178563505;178563504;178563503 | chr2:179428232;179428231;179428230 |
N2A | 24975 | 75148;75149;75150 | chr2:178563505;178563504;178563503 | chr2:179428232;179428231;179428230 |
N2B | 18478 | 55657;55658;55659 | chr2:178563505;178563504;178563503 | chr2:179428232;179428231;179428230 |
Novex-1 | 18603 | 56032;56033;56034 | chr2:178563505;178563504;178563503 | chr2:179428232;179428231;179428230 |
Novex-2 | 18670 | 56233;56234;56235 | chr2:178563505;178563504;178563503 | chr2:179428232;179428231;179428230 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.722 | N | 0.514 | 0.349 | 0.384752662912 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.877 | likely_pathogenic | 0.8922 | pathogenic | -1.771 | Destabilizing | 0.633 | D | 0.538 | neutral | None | None | None | None | N |
R/C | 0.3582 | ambiguous | 0.3187 | benign | -1.726 | Destabilizing | 0.996 | D | 0.746 | deleterious | None | None | None | None | N |
R/D | 0.9909 | likely_pathogenic | 0.9918 | pathogenic | -0.854 | Destabilizing | 0.923 | D | 0.586 | neutral | None | None | None | None | N |
R/E | 0.869 | likely_pathogenic | 0.879 | pathogenic | -0.635 | Destabilizing | 0.633 | D | 0.538 | neutral | None | None | None | None | N |
R/F | 0.9244 | likely_pathogenic | 0.924 | pathogenic | -0.945 | Destabilizing | 0.987 | D | 0.747 | deleterious | None | None | None | None | N |
R/G | 0.8895 | likely_pathogenic | 0.9065 | pathogenic | -2.125 | Highly Destabilizing | 0.722 | D | 0.551 | neutral | D | 0.559909185 | None | None | N |
R/H | 0.2105 | likely_benign | 0.1873 | benign | -1.946 | Destabilizing | 0.961 | D | 0.557 | neutral | None | None | None | None | N |
R/I | 0.7922 | likely_pathogenic | 0.7785 | pathogenic | -0.749 | Destabilizing | 0.949 | D | 0.731 | prob.delet. | D | 0.523700675 | None | None | N |
R/K | 0.2554 | likely_benign | 0.2669 | benign | -1.215 | Destabilizing | 0.003 | N | 0.263 | neutral | N | 0.489805889 | None | None | N |
R/L | 0.6491 | likely_pathogenic | 0.6744 | pathogenic | -0.749 | Destabilizing | 0.775 | D | 0.551 | neutral | None | None | None | None | N |
R/M | 0.7673 | likely_pathogenic | 0.7589 | pathogenic | -1.303 | Destabilizing | 0.996 | D | 0.624 | neutral | None | None | None | None | N |
R/N | 0.9665 | likely_pathogenic | 0.9653 | pathogenic | -1.227 | Destabilizing | 0.923 | D | 0.503 | neutral | None | None | None | None | N |
R/P | 0.9959 | likely_pathogenic | 0.9976 | pathogenic | -1.078 | Destabilizing | 0.961 | D | 0.675 | neutral | None | None | None | None | N |
R/Q | 0.2224 | likely_benign | 0.2276 | benign | -1.067 | Destabilizing | 0.858 | D | 0.531 | neutral | None | None | None | None | N |
R/S | 0.9166 | likely_pathogenic | 0.9216 | pathogenic | -2.077 | Highly Destabilizing | 0.565 | D | 0.517 | neutral | N | 0.520405312 | None | None | N |
R/T | 0.8395 | likely_pathogenic | 0.8262 | pathogenic | -1.647 | Destabilizing | 0.722 | D | 0.514 | neutral | N | 0.503719862 | None | None | N |
R/V | 0.8151 | likely_pathogenic | 0.8157 | pathogenic | -1.078 | Destabilizing | 0.923 | D | 0.682 | prob.neutral | None | None | None | None | N |
R/W | 0.5199 | ambiguous | 0.5179 | ambiguous | -0.491 | Destabilizing | 0.996 | D | 0.704 | prob.neutral | None | None | None | None | N |
R/Y | 0.8603 | likely_pathogenic | 0.8397 | pathogenic | -0.333 | Destabilizing | 0.987 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.