Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27547 | 82864;82865;82866 | chr2:178563493;178563492;178563491 | chr2:179428220;179428219;179428218 |
N2AB | 25906 | 77941;77942;77943 | chr2:178563493;178563492;178563491 | chr2:179428220;179428219;179428218 |
N2A | 24979 | 75160;75161;75162 | chr2:178563493;178563492;178563491 | chr2:179428220;179428219;179428218 |
N2B | 18482 | 55669;55670;55671 | chr2:178563493;178563492;178563491 | chr2:179428220;179428219;179428218 |
Novex-1 | 18607 | 56044;56045;56046 | chr2:178563493;178563492;178563491 | chr2:179428220;179428219;179428218 |
Novex-2 | 18674 | 56245;56246;56247 | chr2:178563493;178563492;178563491 | chr2:179428220;179428219;179428218 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs779874042 | -0.475 | 0.999 | N | 0.516 | 0.416 | 0.33440975612 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.63399E-04 | None | 0 | 0 | 0 |
E/K | rs779874042 | -0.475 | 0.999 | N | 0.516 | 0.416 | 0.33440975612 | gnomAD-4.0.0 | 1.02633E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.73901E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2318 | likely_benign | 0.2496 | benign | -0.941 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.472303383 | None | None | N |
E/C | 0.7977 | likely_pathogenic | 0.8304 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/D | 0.6201 | likely_pathogenic | 0.6808 | pathogenic | -1.292 | Destabilizing | 0.999 | D | 0.481 | neutral | N | 0.512843987 | None | None | N |
E/F | 0.7911 | likely_pathogenic | 0.8254 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
E/G | 0.3548 | ambiguous | 0.374 | ambiguous | -1.291 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.498854335 | None | None | N |
E/H | 0.6258 | likely_pathogenic | 0.6887 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
E/I | 0.2827 | likely_benign | 0.3308 | benign | 0.013 | Stabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
E/K | 0.1411 | likely_benign | 0.165 | benign | -0.656 | Destabilizing | 0.999 | D | 0.516 | neutral | N | 0.472823589 | None | None | N |
E/L | 0.4453 | ambiguous | 0.4824 | ambiguous | 0.013 | Stabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
E/M | 0.4072 | ambiguous | 0.442 | ambiguous | 0.553 | Stabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
E/N | 0.6089 | likely_pathogenic | 0.6637 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/P | 0.9879 | likely_pathogenic | 0.992 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Q | 0.1174 | likely_benign | 0.1229 | benign | -0.925 | Destabilizing | 1.0 | D | 0.604 | neutral | N | 0.479798574 | None | None | N |
E/R | 0.2316 | likely_benign | 0.2674 | benign | -0.53 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/S | 0.3595 | ambiguous | 0.3945 | ambiguous | -1.408 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
E/T | 0.31 | likely_benign | 0.3437 | ambiguous | -1.107 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
E/V | 0.1572 | likely_benign | 0.1765 | benign | -0.284 | Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.458270131 | None | None | N |
E/W | 0.923 | likely_pathogenic | 0.9457 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
E/Y | 0.7641 | likely_pathogenic | 0.8065 | pathogenic | -0.513 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.