Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27550 | 82873;82874;82875 | chr2:178563484;178563483;178563482 | chr2:179428211;179428210;179428209 |
N2AB | 25909 | 77950;77951;77952 | chr2:178563484;178563483;178563482 | chr2:179428211;179428210;179428209 |
N2A | 24982 | 75169;75170;75171 | chr2:178563484;178563483;178563482 | chr2:179428211;179428210;179428209 |
N2B | 18485 | 55678;55679;55680 | chr2:178563484;178563483;178563482 | chr2:179428211;179428210;179428209 |
Novex-1 | 18610 | 56053;56054;56055 | chr2:178563484;178563483;178563482 | chr2:179428211;179428210;179428209 |
Novex-2 | 18677 | 56254;56255;56256 | chr2:178563484;178563483;178563482 | chr2:179428211;179428210;179428209 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs778350547 | -0.152 | 1.0 | N | 0.777 | 0.385 | 0.336155897331 | gnomAD-2.1.1 | 4.42E-05 | None | None | None | None | I | None | 0 | 2.6087E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 3.31126E-04 |
A/T | rs778350547 | -0.152 | 1.0 | N | 0.777 | 0.385 | 0.336155897331 | gnomAD-4.0.0 | 1.59135E-05 | None | None | None | None | I | None | 0 | 1.82932E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 6.04961E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.571 | likely_pathogenic | 0.6631 | pathogenic | -0.779 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
A/D | 0.922 | likely_pathogenic | 0.9332 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.867 | deleterious | N | 0.482168885 | None | None | I |
A/E | 0.8222 | likely_pathogenic | 0.8635 | pathogenic | -0.738 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
A/F | 0.5545 | ambiguous | 0.7003 | pathogenic | -0.918 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
A/G | 0.3176 | likely_benign | 0.3429 | ambiguous | -0.238 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.488636892 | None | None | I |
A/H | 0.8669 | likely_pathogenic | 0.9144 | pathogenic | -0.207 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
A/I | 0.3639 | ambiguous | 0.4728 | ambiguous | -0.387 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
A/K | 0.9111 | likely_pathogenic | 0.9396 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
A/L | 0.4287 | ambiguous | 0.5031 | ambiguous | -0.387 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
A/M | 0.4327 | ambiguous | 0.5553 | ambiguous | -0.455 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
A/N | 0.7926 | likely_pathogenic | 0.8465 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
A/P | 0.9194 | likely_pathogenic | 0.9391 | pathogenic | -0.304 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.538256077 | None | None | I |
A/Q | 0.7752 | likely_pathogenic | 0.8427 | pathogenic | -0.551 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
A/R | 0.8006 | likely_pathogenic | 0.8545 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | I |
A/S | 0.1859 | likely_benign | 0.2043 | benign | -0.418 | Destabilizing | 1.0 | D | 0.618 | neutral | N | 0.484246027 | None | None | I |
A/T | 0.267 | likely_benign | 0.2317 | benign | -0.509 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.484904364 | None | None | I |
A/V | 0.1544 | likely_benign | 0.2274 | benign | -0.304 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.513401056 | None | None | I |
A/W | 0.9271 | likely_pathogenic | 0.9516 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
A/Y | 0.819 | likely_pathogenic | 0.8755 | pathogenic | -0.688 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.