Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27554 | 82885;82886;82887 | chr2:178563472;178563471;178563470 | chr2:179428199;179428198;179428197 |
N2AB | 25913 | 77962;77963;77964 | chr2:178563472;178563471;178563470 | chr2:179428199;179428198;179428197 |
N2A | 24986 | 75181;75182;75183 | chr2:178563472;178563471;178563470 | chr2:179428199;179428198;179428197 |
N2B | 18489 | 55690;55691;55692 | chr2:178563472;178563471;178563470 | chr2:179428199;179428198;179428197 |
Novex-1 | 18614 | 56065;56066;56067 | chr2:178563472;178563471;178563470 | chr2:179428199;179428198;179428197 |
Novex-2 | 18681 | 56266;56267;56268 | chr2:178563472;178563471;178563470 | chr2:179428199;179428198;179428197 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.012 | N | 0.11 | 0.14 | 0.229264304666 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79898E-06 | 0 | 0 |
E/Q | None | None | 0.028 | N | 0.228 | 0.089 | 0.158396225186 | gnomAD-4.0.0 | 6.8424E-07 | None | None | None | None | I | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1124 | likely_benign | 0.1015 | benign | -0.233 | Destabilizing | 0.472 | N | 0.429 | neutral | N | 0.49822096 | None | None | I |
E/C | 0.6713 | likely_pathogenic | 0.6228 | pathogenic | -0.028 | Destabilizing | 0.996 | D | 0.499 | neutral | None | None | None | None | I |
E/D | 0.1142 | likely_benign | 0.1043 | benign | -0.317 | Destabilizing | 0.472 | N | 0.377 | neutral | N | 0.508341953 | None | None | I |
E/F | 0.5227 | ambiguous | 0.4904 | ambiguous | -0.184 | Destabilizing | 0.984 | D | 0.467 | neutral | None | None | None | None | I |
E/G | 0.1428 | likely_benign | 0.1287 | benign | -0.398 | Destabilizing | 0.684 | D | 0.485 | neutral | N | 0.481066022 | None | None | I |
E/H | 0.3497 | ambiguous | 0.3126 | benign | 0.192 | Stabilizing | 0.953 | D | 0.432 | neutral | None | None | None | None | I |
E/I | 0.1781 | likely_benign | 0.1553 | benign | 0.155 | Stabilizing | 0.91 | D | 0.478 | neutral | None | None | None | None | I |
E/K | 0.0951 | likely_benign | 0.0815 | benign | 0.445 | Stabilizing | 0.012 | N | 0.11 | neutral | N | 0.487081246 | None | None | I |
E/L | 0.1882 | likely_benign | 0.1707 | benign | 0.155 | Stabilizing | 0.742 | D | 0.51 | neutral | None | None | None | None | I |
E/M | 0.2437 | likely_benign | 0.2231 | benign | 0.142 | Stabilizing | 0.953 | D | 0.46 | neutral | None | None | None | None | I |
E/N | 0.1951 | likely_benign | 0.1744 | benign | 0.137 | Stabilizing | 0.742 | D | 0.458 | neutral | None | None | None | None | I |
E/P | 0.2345 | likely_benign | 0.2199 | benign | 0.045 | Stabilizing | 0.953 | D | 0.505 | neutral | None | None | None | None | I |
E/Q | 0.1017 | likely_benign | 0.0908 | benign | 0.158 | Stabilizing | 0.028 | N | 0.228 | neutral | N | 0.517249438 | None | None | I |
E/R | 0.171 | likely_benign | 0.148 | benign | 0.647 | Stabilizing | 0.59 | D | 0.407 | neutral | None | None | None | None | I |
E/S | 0.1521 | likely_benign | 0.1373 | benign | -0.002 | Destabilizing | 0.373 | N | 0.378 | neutral | None | None | None | None | I |
E/T | 0.1641 | likely_benign | 0.1468 | benign | 0.136 | Stabilizing | 0.037 | N | 0.303 | neutral | None | None | None | None | I |
E/V | 0.1173 | likely_benign | 0.1029 | benign | 0.045 | Stabilizing | 0.684 | D | 0.509 | neutral | N | 0.478979335 | None | None | I |
E/W | 0.7866 | likely_pathogenic | 0.7601 | pathogenic | -0.07 | Destabilizing | 0.996 | D | 0.573 | neutral | None | None | None | None | I |
E/Y | 0.4317 | ambiguous | 0.384 | ambiguous | 0.058 | Stabilizing | 0.984 | D | 0.467 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.