Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27555 | 82888;82889;82890 | chr2:178563469;178563468;178563467 | chr2:179428196;179428195;179428194 |
N2AB | 25914 | 77965;77966;77967 | chr2:178563469;178563468;178563467 | chr2:179428196;179428195;179428194 |
N2A | 24987 | 75184;75185;75186 | chr2:178563469;178563468;178563467 | chr2:179428196;179428195;179428194 |
N2B | 18490 | 55693;55694;55695 | chr2:178563469;178563468;178563467 | chr2:179428196;179428195;179428194 |
Novex-1 | 18615 | 56068;56069;56070 | chr2:178563469;178563468;178563467 | chr2:179428196;179428195;179428194 |
Novex-2 | 18682 | 56269;56270;56271 | chr2:178563469;178563468;178563467 | chr2:179428196;179428195;179428194 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.338 | N | 0.558 | 0.202 | 0.194818534648 | gnomAD-4.0.0 | 6.84248E-07 | None | None | None | None | I | None | 2.98793E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/L | rs1704434305 | None | 0.338 | N | 0.651 | 0.298 | 0.570825458115 | gnomAD-4.0.0 | 1.59147E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8585E-06 | 0 | 0 |
P/S | rs1704435200 | None | 0.013 | N | 0.37 | 0.256 | 0.193865811164 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 1.8843E-04 | 0 | 0 | 0 | 0 |
P/S | rs1704435200 | None | 0.013 | N | 0.37 | 0.256 | 0.193865811164 | gnomAD-4.0.0 | 3.09888E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 7.81104E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0967 | likely_benign | 0.0934 | benign | -1.392 | Destabilizing | 0.338 | N | 0.558 | neutral | N | 0.474113808 | None | None | I |
P/C | 0.4641 | ambiguous | 0.4343 | ambiguous | -0.842 | Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | I |
P/D | 0.6735 | likely_pathogenic | 0.7203 | pathogenic | -1.284 | Destabilizing | 0.826 | D | 0.549 | neutral | None | None | None | None | I |
P/E | 0.4861 | ambiguous | 0.536 | ambiguous | -1.346 | Destabilizing | 0.826 | D | 0.555 | neutral | None | None | None | None | I |
P/F | 0.3541 | ambiguous | 0.3483 | ambiguous | -1.257 | Destabilizing | 0.01 | N | 0.597 | neutral | None | None | None | None | I |
P/G | 0.416 | ambiguous | 0.4504 | ambiguous | -1.635 | Destabilizing | 0.404 | N | 0.569 | neutral | None | None | None | None | I |
P/H | 0.2689 | likely_benign | 0.287 | benign | -1.156 | Destabilizing | 0.988 | D | 0.698 | prob.neutral | N | 0.521909341 | None | None | I |
P/I | 0.3062 | likely_benign | 0.2882 | benign | -0.848 | Destabilizing | 0.704 | D | 0.713 | prob.delet. | None | None | None | None | I |
P/K | 0.4623 | ambiguous | 0.4815 | ambiguous | -1.133 | Destabilizing | 0.826 | D | 0.551 | neutral | None | None | None | None | I |
P/L | 0.134 | likely_benign | 0.1263 | benign | -0.848 | Destabilizing | 0.338 | N | 0.651 | neutral | N | 0.503004938 | None | None | I |
P/M | 0.3126 | likely_benign | 0.2958 | benign | -0.577 | Destabilizing | 0.973 | D | 0.701 | prob.neutral | None | None | None | None | I |
P/N | 0.4823 | ambiguous | 0.5161 | ambiguous | -0.815 | Destabilizing | 0.826 | D | 0.648 | neutral | None | None | None | None | I |
P/Q | 0.2756 | likely_benign | 0.2956 | benign | -1.093 | Destabilizing | 0.826 | D | 0.609 | neutral | None | None | None | None | I |
P/R | 0.3059 | likely_benign | 0.3256 | benign | -0.515 | Destabilizing | 0.782 | D | 0.683 | prob.neutral | N | 0.520895383 | None | None | I |
P/S | 0.1968 | likely_benign | 0.2112 | benign | -1.244 | Destabilizing | 0.013 | N | 0.37 | neutral | N | 0.502030659 | None | None | I |
P/T | 0.1723 | likely_benign | 0.1728 | benign | -1.214 | Destabilizing | 0.338 | N | 0.504 | neutral | N | 0.509792567 | None | None | I |
P/V | 0.2115 | likely_benign | 0.2006 | benign | -0.995 | Destabilizing | 0.704 | D | 0.603 | neutral | None | None | None | None | I |
P/W | 0.5352 | ambiguous | 0.5474 | ambiguous | -1.352 | Destabilizing | 0.973 | D | 0.747 | deleterious | None | None | None | None | I |
P/Y | 0.3514 | ambiguous | 0.3456 | ambiguous | -1.104 | Destabilizing | 0.704 | D | 0.736 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.