Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27556 | 82891;82892;82893 | chr2:178563466;178563465;178563464 | chr2:179428193;179428192;179428191 |
N2AB | 25915 | 77968;77969;77970 | chr2:178563466;178563465;178563464 | chr2:179428193;179428192;179428191 |
N2A | 24988 | 75187;75188;75189 | chr2:178563466;178563465;178563464 | chr2:179428193;179428192;179428191 |
N2B | 18491 | 55696;55697;55698 | chr2:178563466;178563465;178563464 | chr2:179428193;179428192;179428191 |
Novex-1 | 18616 | 56071;56072;56073 | chr2:178563466;178563465;178563464 | chr2:179428193;179428192;179428191 |
Novex-2 | 18683 | 56272;56273;56274 | chr2:178563466;178563465;178563464 | chr2:179428193;179428192;179428191 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1181121628 | -1.004 | 0.999 | D | 0.887 | 0.626 | 0.49908893446 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/G | rs1181121628 | -1.004 | 0.999 | D | 0.887 | 0.626 | 0.49908893446 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3398 | likely_benign | 0.5125 | ambiguous | -0.665 | Destabilizing | 0.998 | D | 0.854 | deleterious | None | None | None | None | N |
S/C | 0.4294 | ambiguous | 0.5743 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.573311812 | None | None | N |
S/D | 0.9903 | likely_pathogenic | 0.99 | pathogenic | -1.857 | Destabilizing | 0.999 | D | 0.898 | deleterious | None | None | None | None | N |
S/E | 0.9914 | likely_pathogenic | 0.9926 | pathogenic | -1.749 | Destabilizing | 0.999 | D | 0.898 | deleterious | None | None | None | None | N |
S/F | 0.986 | likely_pathogenic | 0.9918 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
S/G | 0.35 | ambiguous | 0.4283 | ambiguous | -0.98 | Destabilizing | 0.999 | D | 0.887 | deleterious | D | 0.528340663 | None | None | N |
S/H | 0.9871 | likely_pathogenic | 0.9891 | pathogenic | -1.431 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
S/I | 0.9632 | likely_pathogenic | 0.9775 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.923 | deleterious | D | 0.572804833 | None | None | N |
S/K | 0.9982 | likely_pathogenic | 0.9984 | pathogenic | -0.865 | Destabilizing | 0.999 | D | 0.892 | deleterious | None | None | None | None | N |
S/L | 0.8105 | likely_pathogenic | 0.891 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
S/M | 0.9279 | likely_pathogenic | 0.9549 | pathogenic | 0.075 | Stabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
S/N | 0.9539 | likely_pathogenic | 0.962 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.902 | deleterious | D | 0.572551344 | None | None | N |
S/P | 0.9714 | likely_pathogenic | 0.9811 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
S/Q | 0.9879 | likely_pathogenic | 0.9903 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
S/R | 0.9954 | likely_pathogenic | 0.9959 | pathogenic | -0.936 | Destabilizing | 1.0 | D | 0.9 | deleterious | D | 0.55368662 | None | None | N |
S/T | 0.4567 | ambiguous | 0.5 | ambiguous | -0.99 | Destabilizing | 0.999 | D | 0.899 | deleterious | D | 0.535782948 | None | None | N |
S/V | 0.892 | likely_pathogenic | 0.943 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
S/W | 0.989 | likely_pathogenic | 0.9912 | pathogenic | -0.783 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
S/Y | 0.9853 | likely_pathogenic | 0.9883 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.923 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.