Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27557 | 82894;82895;82896 | chr2:178563463;178563462;178563461 | chr2:179428190;179428189;179428188 |
N2AB | 25916 | 77971;77972;77973 | chr2:178563463;178563462;178563461 | chr2:179428190;179428189;179428188 |
N2A | 24989 | 75190;75191;75192 | chr2:178563463;178563462;178563461 | chr2:179428190;179428189;179428188 |
N2B | 18492 | 55699;55700;55701 | chr2:178563463;178563462;178563461 | chr2:179428190;179428189;179428188 |
Novex-1 | 18617 | 56074;56075;56076 | chr2:178563463;178563462;178563461 | chr2:179428190;179428189;179428188 |
Novex-2 | 18684 | 56275;56276;56277 | chr2:178563463;178563462;178563461 | chr2:179428190;179428189;179428188 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1276281571 | None | 0.817 | N | 0.419 | 0.055 | 0.187945064343 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1276281571 | None | 0.817 | N | 0.419 | 0.055 | 0.187945064343 | gnomAD-4.0.0 | 6.57505E-06 | None | None | None | None | I | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1704429643 | None | 0.817 | N | 0.313 | 0.182 | 0.338110398507 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs1704429643 | None | 0.817 | N | 0.313 | 0.182 | 0.338110398507 | gnomAD-4.0.0 | 6.57774E-06 | None | None | None | None | I | None | 0 | 6.56082E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1481869771 | 0.707 | 0.915 | N | 0.375 | 0.192 | 0.306695030598 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1481869771 | 0.707 | 0.915 | N | 0.375 | 0.192 | 0.306695030598 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07211E-04 | 0 |
E/K | rs1481869771 | 0.707 | 0.915 | N | 0.375 | 0.192 | 0.306695030598 | gnomAD-4.0.0 | 6.40705E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.70026E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0985 | likely_benign | 0.0947 | benign | -0.344 | Destabilizing | 0.057 | N | 0.198 | neutral | N | 0.476496106 | None | None | I |
E/C | 0.6779 | likely_pathogenic | 0.6458 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.379 | neutral | None | None | None | None | I |
E/D | 0.0914 | likely_benign | 0.0946 | benign | -0.344 | Destabilizing | 0.817 | D | 0.419 | neutral | N | 0.469127417 | None | None | I |
E/F | 0.5409 | ambiguous | 0.5397 | ambiguous | -0.166 | Destabilizing | 0.997 | D | 0.403 | neutral | None | None | None | None | I |
E/G | 0.1147 | likely_benign | 0.1112 | benign | -0.537 | Destabilizing | 0.817 | D | 0.313 | neutral | N | 0.520345671 | None | None | I |
E/H | 0.3336 | likely_benign | 0.3301 | benign | 0.167 | Stabilizing | 0.997 | D | 0.383 | neutral | None | None | None | None | I |
E/I | 0.1962 | likely_benign | 0.1892 | benign | 0.127 | Stabilizing | 0.99 | D | 0.433 | neutral | None | None | None | None | I |
E/K | 0.0905 | likely_benign | 0.0912 | benign | 0.351 | Stabilizing | 0.915 | D | 0.375 | neutral | N | 0.506723013 | None | None | I |
E/L | 0.1886 | likely_benign | 0.182 | benign | 0.127 | Stabilizing | 0.935 | D | 0.443 | neutral | None | None | None | None | I |
E/M | 0.259 | likely_benign | 0.2541 | benign | 0.15 | Stabilizing | 0.999 | D | 0.405 | neutral | None | None | None | None | I |
E/N | 0.1744 | likely_benign | 0.175 | benign | -0.053 | Destabilizing | 0.935 | D | 0.389 | neutral | None | None | None | None | I |
E/P | 0.2033 | likely_benign | 0.2016 | benign | -0.01 | Destabilizing | 0.043 | N | 0.292 | neutral | None | None | None | None | I |
E/Q | 0.1013 | likely_benign | 0.0981 | benign | -0.003 | Destabilizing | 0.956 | D | 0.467 | neutral | N | 0.479056409 | None | None | I |
E/R | 0.163 | likely_benign | 0.1608 | benign | 0.593 | Stabilizing | 0.967 | D | 0.396 | neutral | None | None | None | None | I |
E/S | 0.1293 | likely_benign | 0.1262 | benign | -0.193 | Destabilizing | 0.358 | N | 0.148 | neutral | None | None | None | None | I |
E/T | 0.1448 | likely_benign | 0.1449 | benign | -0.028 | Destabilizing | 0.877 | D | 0.345 | neutral | None | None | None | None | I |
E/V | 0.1236 | likely_benign | 0.1193 | benign | -0.01 | Destabilizing | 0.915 | D | 0.425 | neutral | N | 0.521345749 | None | None | I |
E/W | 0.7916 | likely_pathogenic | 0.7927 | pathogenic | -0.001 | Destabilizing | 0.999 | D | 0.483 | neutral | None | None | None | None | I |
E/Y | 0.4298 | ambiguous | 0.4168 | ambiguous | 0.082 | Stabilizing | 0.997 | D | 0.437 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.