Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27561 | 82906;82907;82908 | chr2:178563451;178563450;178563449 | chr2:179428178;179428177;179428176 |
N2AB | 25920 | 77983;77984;77985 | chr2:178563451;178563450;178563449 | chr2:179428178;179428177;179428176 |
N2A | 24993 | 75202;75203;75204 | chr2:178563451;178563450;178563449 | chr2:179428178;179428177;179428176 |
N2B | 18496 | 55711;55712;55713 | chr2:178563451;178563450;178563449 | chr2:179428178;179428177;179428176 |
Novex-1 | 18621 | 56086;56087;56088 | chr2:178563451;178563450;178563449 | chr2:179428178;179428177;179428176 |
Novex-2 | 18688 | 56287;56288;56289 | chr2:178563451;178563450;178563449 | chr2:179428178;179428177;179428176 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | None | None | 0.013 | N | 0.45 | 0.215 | 0.641573772263 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5387 | ambiguous | 0.556 | ambiguous | -1.901 | Destabilizing | 0.216 | N | 0.504 | neutral | None | None | None | None | N |
F/C | 0.3156 | likely_benign | 0.3321 | benign | -0.825 | Destabilizing | 0.988 | D | 0.608 | neutral | N | 0.479883128 | None | None | N |
F/D | 0.8276 | likely_pathogenic | 0.8232 | pathogenic | 0.207 | Stabilizing | 0.824 | D | 0.663 | prob.neutral | None | None | None | None | N |
F/E | 0.877 | likely_pathogenic | 0.8719 | pathogenic | 0.261 | Stabilizing | 0.571 | D | 0.668 | prob.neutral | None | None | None | None | N |
F/G | 0.7306 | likely_pathogenic | 0.7475 | pathogenic | -2.189 | Highly Destabilizing | 0.4 | N | 0.589 | neutral | None | None | None | None | N |
F/H | 0.5905 | likely_pathogenic | 0.6016 | pathogenic | -0.403 | Destabilizing | 0.824 | D | 0.562 | neutral | None | None | None | None | N |
F/I | 0.3935 | ambiguous | 0.3633 | ambiguous | -1.072 | Destabilizing | 0.335 | N | 0.404 | neutral | N | 0.441959458 | None | None | N |
F/K | 0.9105 | likely_pathogenic | 0.9047 | pathogenic | -0.651 | Destabilizing | 0.571 | D | 0.661 | prob.neutral | None | None | None | None | N |
F/L | 0.8032 | likely_pathogenic | 0.8108 | pathogenic | -1.072 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.450194939 | None | None | N |
F/M | 0.6612 | likely_pathogenic | 0.6541 | pathogenic | -0.789 | Destabilizing | 0.824 | D | 0.487 | neutral | None | None | None | None | N |
F/N | 0.6047 | likely_pathogenic | 0.6332 | pathogenic | -0.558 | Destabilizing | 0.824 | D | 0.673 | prob.neutral | None | None | None | None | N |
F/P | 0.6985 | likely_pathogenic | 0.7372 | pathogenic | -1.337 | Destabilizing | 0.905 | D | 0.673 | prob.neutral | None | None | None | None | N |
F/Q | 0.8156 | likely_pathogenic | 0.8164 | pathogenic | -0.661 | Destabilizing | 0.824 | D | 0.668 | prob.neutral | None | None | None | None | N |
F/R | 0.7906 | likely_pathogenic | 0.7864 | pathogenic | -0.022 | Destabilizing | 0.824 | D | 0.665 | prob.neutral | None | None | None | None | N |
F/S | 0.3946 | ambiguous | 0.4147 | ambiguous | -1.474 | Destabilizing | 0.013 | N | 0.45 | neutral | N | 0.474418593 | None | None | N |
F/T | 0.6013 | likely_pathogenic | 0.6054 | pathogenic | -1.333 | Destabilizing | 0.4 | N | 0.563 | neutral | None | None | None | None | N |
F/V | 0.3534 | ambiguous | 0.3482 | ambiguous | -1.337 | Destabilizing | 0.172 | N | 0.531 | neutral | N | 0.467431119 | None | None | N |
F/W | 0.5132 | ambiguous | 0.4988 | ambiguous | -0.27 | Destabilizing | 0.905 | D | 0.459 | neutral | None | None | None | None | N |
F/Y | 0.1125 | likely_benign | 0.1191 | benign | -0.423 | Destabilizing | 0.006 | N | 0.135 | neutral | N | 0.396208526 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.