Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27570 | 82933;82934;82935 | chr2:178563424;178563423;178563422 | chr2:179428151;179428150;179428149 |
N2AB | 25929 | 78010;78011;78012 | chr2:178563424;178563423;178563422 | chr2:179428151;179428150;179428149 |
N2A | 25002 | 75229;75230;75231 | chr2:178563424;178563423;178563422 | chr2:179428151;179428150;179428149 |
N2B | 18505 | 55738;55739;55740 | chr2:178563424;178563423;178563422 | chr2:179428151;179428150;179428149 |
Novex-1 | 18630 | 56113;56114;56115 | chr2:178563424;178563423;178563422 | chr2:179428151;179428150;179428149 |
Novex-2 | 18697 | 56314;56315;56316 | chr2:178563424;178563423;178563422 | chr2:179428151;179428150;179428149 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1704409600 | None | 1.0 | N | 0.703 | 0.446 | 0.601121310199 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85838E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.122 | likely_benign | 0.1235 | benign | -0.649 | Destabilizing | 0.999 | D | 0.72 | deleterious | N | 0.471690591 | None | None | I |
P/C | 0.552 | ambiguous | 0.5497 | ambiguous | -0.637 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
P/D | 0.8932 | likely_pathogenic | 0.8795 | pathogenic | -0.146 | Destabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | I |
P/E | 0.513 | ambiguous | 0.493 | ambiguous | -0.254 | Destabilizing | 1.0 | D | 0.725 | deleterious | None | None | None | None | I |
P/F | 0.7688 | likely_pathogenic | 0.7595 | pathogenic | -0.853 | Destabilizing | 1.0 | D | 0.721 | deleterious | None | None | None | None | I |
P/G | 0.641 | likely_pathogenic | 0.6363 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
P/H | 0.3784 | ambiguous | 0.3817 | ambiguous | -0.354 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
P/I | 0.3053 | likely_benign | 0.2789 | benign | -0.399 | Destabilizing | 1.0 | D | 0.69 | prob.delet. | None | None | None | None | I |
P/K | 0.2236 | likely_benign | 0.2423 | benign | -0.359 | Destabilizing | 1.0 | D | 0.722 | deleterious | None | None | None | None | I |
P/L | 0.1465 | likely_benign | 0.148 | benign | -0.399 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | N | 0.487250405 | None | None | I |
P/M | 0.4073 | ambiguous | 0.3979 | ambiguous | -0.292 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
P/N | 0.7329 | likely_pathogenic | 0.7304 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | I |
P/Q | 0.2218 | likely_benign | 0.2218 | benign | -0.359 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | D | 0.530855655 | None | None | I |
P/R | 0.1703 | likely_benign | 0.1802 | benign | 0.14 | Stabilizing | 1.0 | D | 0.693 | prob.delet. | N | 0.493633187 | None | None | I |
P/S | 0.2944 | likely_benign | 0.2929 | benign | -0.538 | Destabilizing | 1.0 | D | 0.735 | deleterious | N | 0.50385063 | None | None | I |
P/T | 0.1775 | likely_benign | 0.1833 | benign | -0.544 | Destabilizing | 1.0 | D | 0.721 | deleterious | D | 0.529588208 | None | None | I |
P/V | 0.1964 | likely_benign | 0.1754 | benign | -0.447 | Destabilizing | 1.0 | D | 0.732 | deleterious | None | None | None | None | I |
P/W | 0.8814 | likely_pathogenic | 0.8755 | pathogenic | -0.894 | Destabilizing | 1.0 | D | 0.685 | prob.delet. | None | None | None | None | I |
P/Y | 0.7392 | likely_pathogenic | 0.7385 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.705 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.