Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27576 | 82951;82952;82953 | chr2:178563406;178563405;178563404 | chr2:179428133;179428132;179428131 |
N2AB | 25935 | 78028;78029;78030 | chr2:178563406;178563405;178563404 | chr2:179428133;179428132;179428131 |
N2A | 25008 | 75247;75248;75249 | chr2:178563406;178563405;178563404 | chr2:179428133;179428132;179428131 |
N2B | 18511 | 55756;55757;55758 | chr2:178563406;178563405;178563404 | chr2:179428133;179428132;179428131 |
Novex-1 | 18636 | 56131;56132;56133 | chr2:178563406;178563405;178563404 | chr2:179428133;179428132;179428131 |
Novex-2 | 18703 | 56332;56333;56334 | chr2:178563406;178563405;178563404 | chr2:179428133;179428132;179428131 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs773621324 | 0.444 | 0.999 | D | 0.569 | 0.327 | 0.273938319068 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3439 | ambiguous | 0.3068 | benign | -0.332 | Destabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
N/C | 0.2741 | likely_benign | 0.2663 | benign | 0.332 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
N/D | 0.4603 | ambiguous | 0.3821 | ambiguous | 0.019 | Stabilizing | 0.999 | D | 0.597 | neutral | N | 0.48902826 | None | None | N |
N/E | 0.7688 | likely_pathogenic | 0.6918 | pathogenic | -0.024 | Destabilizing | 0.999 | D | 0.662 | neutral | None | None | None | None | N |
N/F | 0.5248 | ambiguous | 0.5108 | ambiguous | -0.741 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/G | 0.4331 | ambiguous | 0.4078 | ambiguous | -0.493 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
N/H | 0.141 | likely_benign | 0.1353 | benign | -0.549 | Destabilizing | 1.0 | D | 0.587 | neutral | N | 0.488532577 | None | None | N |
N/I | 0.2701 | likely_benign | 0.2478 | benign | 0.001 | Stabilizing | 1.0 | D | 0.71 | prob.delet. | N | 0.508598615 | None | None | N |
N/K | 0.6544 | likely_pathogenic | 0.5761 | pathogenic | 0.087 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.515734859 | None | None | N |
N/L | 0.2723 | likely_benign | 0.2493 | benign | 0.001 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
N/M | 0.3824 | ambiguous | 0.3681 | ambiguous | 0.373 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
N/P | 0.824 | likely_pathogenic | 0.7768 | pathogenic | -0.084 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
N/Q | 0.5187 | ambiguous | 0.4731 | ambiguous | -0.401 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
N/R | 0.6343 | likely_pathogenic | 0.5815 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
N/S | 0.1027 | likely_benign | 0.0942 | benign | -0.135 | Destabilizing | 0.999 | D | 0.569 | neutral | D | 0.524797059 | None | None | N |
N/T | 0.2156 | likely_benign | 0.1934 | benign | -0.04 | Destabilizing | 0.999 | D | 0.661 | neutral | D | 0.529280159 | None | None | N |
N/V | 0.2659 | likely_benign | 0.2491 | benign | -0.084 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
N/W | 0.8555 | likely_pathogenic | 0.8314 | pathogenic | -0.735 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
N/Y | 0.2121 | likely_benign | 0.1906 | benign | -0.466 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | D | 0.532236278 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.