Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27577 | 82954;82955;82956 | chr2:178563403;178563402;178563401 | chr2:179428130;179428129;179428128 |
N2AB | 25936 | 78031;78032;78033 | chr2:178563403;178563402;178563401 | chr2:179428130;179428129;179428128 |
N2A | 25009 | 75250;75251;75252 | chr2:178563403;178563402;178563401 | chr2:179428130;179428129;179428128 |
N2B | 18512 | 55759;55760;55761 | chr2:178563403;178563402;178563401 | chr2:179428130;179428129;179428128 |
Novex-1 | 18637 | 56134;56135;56136 | chr2:178563403;178563402;178563401 | chr2:179428130;179428129;179428128 |
Novex-2 | 18704 | 56335;56336;56337 | chr2:178563403;178563402;178563401 | chr2:179428130;179428129;179428128 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.928 | N | 0.725 | 0.34 | 0.321672782286 | gnomAD-4.0.0 | 6.84256E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
P/T | None | None | 0.978 | D | 0.777 | 0.405 | 0.419957187557 | gnomAD-4.0.0 | 6.84256E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99484E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2029 | likely_benign | 0.178 | benign | -1.88 | Destabilizing | 0.928 | D | 0.725 | prob.delet. | N | 0.488739024 | None | None | N |
P/C | 0.7109 | likely_pathogenic | 0.6698 | pathogenic | -1.375 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
P/D | 0.9924 | likely_pathogenic | 0.9878 | pathogenic | -2.164 | Highly Destabilizing | 0.997 | D | 0.79 | deleterious | None | None | None | None | N |
P/E | 0.9668 | likely_pathogenic | 0.9508 | pathogenic | -2.055 | Highly Destabilizing | 0.992 | D | 0.789 | deleterious | None | None | None | None | N |
P/F | 0.8677 | likely_pathogenic | 0.8151 | pathogenic | -1.296 | Destabilizing | 0.991 | D | 0.891 | deleterious | None | None | None | None | N |
P/G | 0.8297 | likely_pathogenic | 0.7832 | pathogenic | -2.325 | Highly Destabilizing | 0.992 | D | 0.816 | deleterious | None | None | None | None | N |
P/H | 0.9099 | likely_pathogenic | 0.8621 | pathogenic | -2.068 | Highly Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
P/I | 0.3937 | ambiguous | 0.3483 | ambiguous | -0.695 | Destabilizing | 0.968 | D | 0.84 | deleterious | None | None | None | None | N |
P/K | 0.9636 | likely_pathogenic | 0.943 | pathogenic | -1.589 | Destabilizing | 0.992 | D | 0.794 | deleterious | None | None | None | None | N |
P/L | 0.2127 | likely_benign | 0.1875 | benign | -0.695 | Destabilizing | 0.085 | N | 0.675 | neutral | N | 0.44955186 | None | None | N |
P/M | 0.5871 | likely_pathogenic | 0.5397 | ambiguous | -0.577 | Destabilizing | 0.996 | D | 0.866 | deleterious | None | None | None | None | N |
P/N | 0.9686 | likely_pathogenic | 0.9508 | pathogenic | -1.607 | Destabilizing | 0.997 | D | 0.848 | deleterious | None | None | None | None | N |
P/Q | 0.8756 | likely_pathogenic | 0.8252 | pathogenic | -1.619 | Destabilizing | 0.996 | D | 0.805 | deleterious | D | 0.538963639 | None | None | N |
P/R | 0.9184 | likely_pathogenic | 0.8774 | pathogenic | -1.251 | Destabilizing | 0.989 | D | 0.845 | deleterious | D | 0.538963639 | None | None | N |
P/S | 0.6903 | likely_pathogenic | 0.6126 | pathogenic | -2.191 | Highly Destabilizing | 0.989 | D | 0.784 | deleterious | N | 0.520605895 | None | None | N |
P/T | 0.4263 | ambiguous | 0.3556 | ambiguous | -1.955 | Destabilizing | 0.978 | D | 0.777 | deleterious | D | 0.527100355 | None | None | N |
P/V | 0.2722 | likely_benign | 0.2353 | benign | -1.059 | Destabilizing | 0.968 | D | 0.789 | deleterious | None | None | None | None | N |
P/W | 0.9691 | likely_pathogenic | 0.95 | pathogenic | -1.707 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
P/Y | 0.9439 | likely_pathogenic | 0.9127 | pathogenic | -1.353 | Destabilizing | 0.998 | D | 0.893 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.