Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27579 | 82960;82961;82962 | chr2:178563397;178563396;178563395 | chr2:179428124;179428123;179428122 |
N2AB | 25938 | 78037;78038;78039 | chr2:178563397;178563396;178563395 | chr2:179428124;179428123;179428122 |
N2A | 25011 | 75256;75257;75258 | chr2:178563397;178563396;178563395 | chr2:179428124;179428123;179428122 |
N2B | 18514 | 55765;55766;55767 | chr2:178563397;178563396;178563395 | chr2:179428124;179428123;179428122 |
Novex-1 | 18639 | 56140;56141;56142 | chr2:178563397;178563396;178563395 | chr2:179428124;179428123;179428122 |
Novex-2 | 18706 | 56341;56342;56343 | chr2:178563397;178563396;178563395 | chr2:179428124;179428123;179428122 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | None | None | 0.988 | N | 0.724 | 0.434 | 0.484109215787 | gnomAD-4.0.0 | 1.59154E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4008 | ambiguous | 0.3833 | ambiguous | -1.391 | Destabilizing | 0.958 | D | 0.545 | neutral | N | 0.498645034 | None | None | N |
V/C | 0.8709 | likely_pathogenic | 0.8643 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/D | 0.9466 | likely_pathogenic | 0.9156 | pathogenic | -0.782 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
V/E | 0.8564 | likely_pathogenic | 0.8167 | pathogenic | -0.765 | Destabilizing | 0.994 | D | 0.796 | deleterious | D | 0.525639686 | None | None | N |
V/F | 0.569 | likely_pathogenic | 0.5164 | ambiguous | -1.03 | Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
V/G | 0.6669 | likely_pathogenic | 0.5885 | pathogenic | -1.726 | Destabilizing | 0.994 | D | 0.778 | deleterious | D | 0.535982034 | None | None | N |
V/H | 0.9573 | likely_pathogenic | 0.9439 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
V/I | 0.0803 | likely_benign | 0.0899 | benign | -0.573 | Destabilizing | 0.862 | D | 0.548 | neutral | None | None | None | None | N |
V/K | 0.9062 | likely_pathogenic | 0.8756 | pathogenic | -1.09 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
V/L | 0.4338 | ambiguous | 0.3991 | ambiguous | -0.573 | Destabilizing | 0.067 | N | 0.257 | neutral | N | 0.479285731 | None | None | N |
V/M | 0.3619 | ambiguous | 0.3377 | benign | -0.574 | Destabilizing | 0.988 | D | 0.724 | prob.delet. | N | 0.513104839 | None | None | N |
V/N | 0.8595 | likely_pathogenic | 0.8286 | pathogenic | -0.946 | Destabilizing | 0.998 | D | 0.836 | deleterious | None | None | None | None | N |
V/P | 0.6844 | likely_pathogenic | 0.6491 | pathogenic | -0.81 | Destabilizing | 0.998 | D | 0.828 | deleterious | None | None | None | None | N |
V/Q | 0.8774 | likely_pathogenic | 0.8448 | pathogenic | -1.052 | Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
V/R | 0.9041 | likely_pathogenic | 0.8686 | pathogenic | -0.626 | Destabilizing | 0.995 | D | 0.835 | deleterious | None | None | None | None | N |
V/S | 0.7309 | likely_pathogenic | 0.6953 | pathogenic | -1.571 | Destabilizing | 0.995 | D | 0.777 | deleterious | None | None | None | None | N |
V/T | 0.6066 | likely_pathogenic | 0.5963 | pathogenic | -1.42 | Destabilizing | 0.968 | D | 0.626 | neutral | None | None | None | None | N |
V/W | 0.9746 | likely_pathogenic | 0.9655 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/Y | 0.9002 | likely_pathogenic | 0.8632 | pathogenic | -0.871 | Destabilizing | 0.995 | D | 0.823 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.