Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27582 | 82969;82970;82971 | chr2:178563388;178563387;178563386 | chr2:179428115;179428114;179428113 |
N2AB | 25941 | 78046;78047;78048 | chr2:178563388;178563387;178563386 | chr2:179428115;179428114;179428113 |
N2A | 25014 | 75265;75266;75267 | chr2:178563388;178563387;178563386 | chr2:179428115;179428114;179428113 |
N2B | 18517 | 55774;55775;55776 | chr2:178563388;178563387;178563386 | chr2:179428115;179428114;179428113 |
Novex-1 | 18642 | 56149;56150;56151 | chr2:178563388;178563387;178563386 | chr2:179428115;179428114;179428113 |
Novex-2 | 18709 | 56350;56351;56352 | chr2:178563388;178563387;178563386 | chr2:179428115;179428114;179428113 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1704394445 | None | 0.001 | N | 0.074 | 0.098 | 0.211220785272 | gnomAD-4.0.0 | 3.18313E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85861E-06 | 1.43271E-05 | 0 |
T/I | None | None | 0.655 | N | 0.465 | 0.148 | 0.362160248664 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8586E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1116 | likely_benign | 0.1068 | benign | -0.347 | Destabilizing | 0.001 | N | 0.074 | neutral | N | 0.476690894 | None | None | N |
T/C | 0.32 | likely_benign | 0.3241 | benign | -0.829 | Destabilizing | 0.983 | D | 0.352 | neutral | None | None | None | None | N |
T/D | 0.7386 | likely_pathogenic | 0.7071 | pathogenic | -1.791 | Destabilizing | 0.418 | N | 0.39 | neutral | None | None | None | None | N |
T/E | 0.6134 | likely_pathogenic | 0.5911 | pathogenic | -1.779 | Destabilizing | 0.129 | N | 0.406 | neutral | None | None | None | None | N |
T/F | 0.2324 | likely_benign | 0.23 | benign | -1.003 | Destabilizing | 0.836 | D | 0.467 | neutral | None | None | None | None | N |
T/G | 0.3678 | ambiguous | 0.3332 | benign | -0.513 | Destabilizing | 0.129 | N | 0.351 | neutral | None | None | None | None | N |
T/H | 0.2741 | likely_benign | 0.2751 | benign | -1.036 | Destabilizing | 0.002 | N | 0.311 | neutral | None | None | None | None | N |
T/I | 0.1442 | likely_benign | 0.1404 | benign | -0.005 | Destabilizing | 0.655 | D | 0.465 | neutral | N | 0.457024911 | None | None | N |
T/K | 0.3093 | likely_benign | 0.2947 | benign | -0.415 | Destabilizing | 0.002 | N | 0.177 | neutral | None | None | None | None | N |
T/L | 0.1324 | likely_benign | 0.133 | benign | -0.005 | Destabilizing | 0.418 | N | 0.419 | neutral | None | None | None | None | N |
T/M | 0.1144 | likely_benign | 0.1086 | benign | 0.238 | Stabilizing | 0.94 | D | 0.372 | neutral | None | None | None | None | N |
T/N | 0.2313 | likely_benign | 0.2125 | benign | -0.828 | Destabilizing | 0.213 | N | 0.307 | neutral | N | 0.478926428 | None | None | N |
T/P | 0.5234 | ambiguous | 0.5241 | ambiguous | -0.091 | Destabilizing | 0.523 | D | 0.459 | neutral | N | 0.508533954 | None | None | N |
T/Q | 0.3374 | likely_benign | 0.3218 | benign | -1.16 | Destabilizing | 0.418 | N | 0.463 | neutral | None | None | None | None | N |
T/R | 0.2581 | likely_benign | 0.2321 | benign | -0.166 | Destabilizing | 0.264 | N | 0.405 | neutral | None | None | None | None | N |
T/S | 0.1279 | likely_benign | 0.1201 | benign | -0.745 | Destabilizing | 0.003 | N | 0.075 | neutral | N | 0.451987238 | None | None | N |
T/V | 0.114 | likely_benign | 0.1164 | benign | -0.091 | Destabilizing | 0.264 | N | 0.311 | neutral | None | None | None | None | N |
T/W | 0.6376 | likely_pathogenic | 0.644 | pathogenic | -1.134 | Destabilizing | 0.983 | D | 0.449 | neutral | None | None | None | None | N |
T/Y | 0.2833 | likely_benign | 0.2859 | benign | -0.663 | Destabilizing | 0.716 | D | 0.475 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.