Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27588 | 82987;82988;82989 | chr2:178563370;178563369;178563368 | chr2:179428097;179428096;179428095 |
N2AB | 25947 | 78064;78065;78066 | chr2:178563370;178563369;178563368 | chr2:179428097;179428096;179428095 |
N2A | 25020 | 75283;75284;75285 | chr2:178563370;178563369;178563368 | chr2:179428097;179428096;179428095 |
N2B | 18523 | 55792;55793;55794 | chr2:178563370;178563369;178563368 | chr2:179428097;179428096;179428095 |
Novex-1 | 18648 | 56167;56168;56169 | chr2:178563370;178563369;178563368 | chr2:179428097;179428096;179428095 |
Novex-2 | 18715 | 56368;56369;56370 | chr2:178563370;178563369;178563368 | chr2:179428097;179428096;179428095 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.994 | N | 0.714 | 0.425 | 0.628150982837 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1398 | likely_benign | 0.1279 | benign | -0.763 | Destabilizing | 0.773 | D | 0.531 | neutral | N | 0.468268139 | None | None | N |
S/C | 0.1655 | likely_benign | 0.1507 | benign | -0.821 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.495464202 | None | None | N |
S/D | 0.7442 | likely_pathogenic | 0.7068 | pathogenic | -1.172 | Destabilizing | 0.033 | N | 0.432 | neutral | None | None | None | None | N |
S/E | 0.7885 | likely_pathogenic | 0.7704 | pathogenic | -1.147 | Destabilizing | 0.845 | D | 0.541 | neutral | None | None | None | None | N |
S/F | 0.3299 | likely_benign | 0.2719 | benign | -1.11 | Destabilizing | 0.994 | D | 0.714 | prob.delet. | N | 0.468294593 | None | None | N |
S/G | 0.2494 | likely_benign | 0.2279 | benign | -1.001 | Destabilizing | 0.916 | D | 0.547 | neutral | None | None | None | None | N |
S/H | 0.5544 | ambiguous | 0.5127 | ambiguous | -1.541 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/I | 0.3129 | likely_benign | 0.2872 | benign | -0.229 | Destabilizing | 0.987 | D | 0.688 | prob.neutral | None | None | None | None | N |
S/K | 0.8968 | likely_pathogenic | 0.8804 | pathogenic | -0.702 | Destabilizing | 0.916 | D | 0.577 | neutral | None | None | None | None | N |
S/L | 0.1844 | likely_benign | 0.1618 | benign | -0.229 | Destabilizing | 0.987 | D | 0.645 | neutral | None | None | None | None | N |
S/M | 0.2684 | likely_benign | 0.2714 | benign | 0.073 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/N | 0.345 | ambiguous | 0.33 | benign | -0.929 | Destabilizing | 0.845 | D | 0.579 | neutral | None | None | None | None | N |
S/P | 0.9761 | likely_pathogenic | 0.9587 | pathogenic | -0.375 | Destabilizing | 0.983 | D | 0.671 | neutral | N | 0.499819068 | None | None | N |
S/Q | 0.686 | likely_pathogenic | 0.6737 | pathogenic | -1.137 | Destabilizing | 0.987 | D | 0.646 | neutral | None | None | None | None | N |
S/R | 0.8557 | likely_pathogenic | 0.8334 | pathogenic | -0.579 | Destabilizing | 0.987 | D | 0.674 | neutral | None | None | None | None | N |
S/T | 0.0841 | likely_benign | 0.0893 | benign | -0.817 | Destabilizing | 0.892 | D | 0.549 | neutral | N | 0.423395127 | None | None | N |
S/V | 0.2879 | likely_benign | 0.2724 | benign | -0.375 | Destabilizing | 0.987 | D | 0.65 | neutral | None | None | None | None | N |
S/W | 0.5682 | likely_pathogenic | 0.4741 | ambiguous | -1.138 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/Y | 0.3643 | ambiguous | 0.2923 | benign | -0.799 | Destabilizing | 0.994 | D | 0.713 | prob.delet. | N | 0.499565578 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.