Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27590 | 82993;82994;82995 | chr2:178563364;178563363;178563362 | chr2:179428091;179428090;179428089 |
N2AB | 25949 | 78070;78071;78072 | chr2:178563364;178563363;178563362 | chr2:179428091;179428090;179428089 |
N2A | 25022 | 75289;75290;75291 | chr2:178563364;178563363;178563362 | chr2:179428091;179428090;179428089 |
N2B | 18525 | 55798;55799;55800 | chr2:178563364;178563363;178563362 | chr2:179428091;179428090;179428089 |
Novex-1 | 18650 | 56173;56174;56175 | chr2:178563364;178563363;178563362 | chr2:179428091;179428090;179428089 |
Novex-2 | 18717 | 56374;56375;56376 | chr2:178563364;178563363;178563362 | chr2:179428091;179428090;179428089 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | None | None | 0.896 | N | 0.719 | 0.329 | 0.462721901306 | gnomAD-4.0.0 | 6.84278E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99515E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3551 | ambiguous | 0.3517 | ambiguous | -1.184 | Destabilizing | 0.977 | D | 0.624 | neutral | None | None | None | None | N |
A/D | 0.4955 | ambiguous | 0.4225 | ambiguous | -2.433 | Highly Destabilizing | 0.617 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/E | 0.3468 | ambiguous | 0.2882 | benign | -2.235 | Highly Destabilizing | 0.379 | N | 0.689 | prob.neutral | N | 0.477458899 | None | None | N |
A/F | 0.2782 | likely_benign | 0.2685 | benign | -0.685 | Destabilizing | 0.85 | D | 0.715 | prob.delet. | None | None | None | None | N |
A/G | 0.1337 | likely_benign | 0.1281 | benign | -1.513 | Destabilizing | 0.334 | N | 0.522 | neutral | N | 0.511515544 | None | None | N |
A/H | 0.4666 | ambiguous | 0.4192 | ambiguous | -2.068 | Highly Destabilizing | 0.977 | D | 0.675 | prob.neutral | None | None | None | None | N |
A/I | 0.225 | likely_benign | 0.2115 | benign | 0.238 | Stabilizing | 0.217 | N | 0.712 | prob.delet. | None | None | None | None | N |
A/K | 0.6231 | likely_pathogenic | 0.5229 | ambiguous | -1.217 | Destabilizing | 0.447 | N | 0.691 | prob.neutral | None | None | None | None | N |
A/L | 0.1587 | likely_benign | 0.1484 | benign | 0.238 | Stabilizing | 0.447 | N | 0.64 | neutral | None | None | None | None | N |
A/M | 0.1924 | likely_benign | 0.1838 | benign | -0.082 | Destabilizing | 0.85 | D | 0.665 | neutral | None | None | None | None | N |
A/N | 0.2686 | likely_benign | 0.2506 | benign | -1.526 | Destabilizing | 0.85 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/P | 0.9553 | likely_pathogenic | 0.9421 | pathogenic | -0.143 | Destabilizing | 0.896 | D | 0.719 | prob.delet. | N | 0.49467728 | None | None | N |
A/Q | 0.3355 | likely_benign | 0.2885 | benign | -1.32 | Destabilizing | 0.048 | N | 0.547 | neutral | None | None | None | None | N |
A/R | 0.5506 | ambiguous | 0.4571 | ambiguous | -1.338 | Destabilizing | 0.739 | D | 0.718 | prob.delet. | None | None | None | None | N |
A/S | 0.0781 | likely_benign | 0.0777 | benign | -1.904 | Destabilizing | 0.02 | N | 0.223 | neutral | N | 0.393106719 | None | None | N |
A/T | 0.0816 | likely_benign | 0.0793 | benign | -1.582 | Destabilizing | 0.016 | N | 0.446 | neutral | N | 0.421085541 | None | None | N |
A/V | 0.1378 | likely_benign | 0.1288 | benign | -0.143 | Destabilizing | 0.004 | N | 0.453 | neutral | N | 0.50934203 | None | None | N |
A/W | 0.7494 | likely_pathogenic | 0.7123 | pathogenic | -1.521 | Destabilizing | 0.992 | D | 0.721 | prob.delet. | None | None | None | None | N |
A/Y | 0.4293 | ambiguous | 0.4099 | ambiguous | -0.932 | Destabilizing | 0.92 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.