Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27592 | 82999;83000;83001 | chr2:178563358;178563357;178563356 | chr2:179428085;179428084;179428083 |
N2AB | 25951 | 78076;78077;78078 | chr2:178563358;178563357;178563356 | chr2:179428085;179428084;179428083 |
N2A | 25024 | 75295;75296;75297 | chr2:178563358;178563357;178563356 | chr2:179428085;179428084;179428083 |
N2B | 18527 | 55804;55805;55806 | chr2:178563358;178563357;178563356 | chr2:179428085;179428084;179428083 |
Novex-1 | 18652 | 56179;56180;56181 | chr2:178563358;178563357;178563356 | chr2:179428085;179428084;179428083 |
Novex-2 | 18719 | 56380;56381;56382 | chr2:178563358;178563357;178563356 | chr2:179428085;179428084;179428083 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | None | N | 0.121 | 0.076 | 0.0716867268079 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85868E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1446 | likely_benign | 0.1301 | benign | -0.539 | Destabilizing | 0.035 | N | 0.277 | neutral | None | None | None | None | I |
S/C | 0.1175 | likely_benign | 0.1083 | benign | -0.402 | Destabilizing | 0.915 | D | 0.485 | neutral | N | 0.478969789 | None | None | I |
S/D | 0.4096 | ambiguous | 0.4067 | ambiguous | -1.057 | Destabilizing | 0.081 | N | 0.389 | neutral | None | None | None | None | I |
S/E | 0.5986 | likely_pathogenic | 0.5614 | ambiguous | -0.937 | Destabilizing | 0.081 | N | 0.365 | neutral | None | None | None | None | I |
S/F | 0.4699 | ambiguous | 0.3997 | ambiguous | -0.485 | Destabilizing | 0.555 | D | 0.591 | neutral | None | None | None | None | I |
S/G | 0.0681 | likely_benign | 0.0667 | benign | -0.911 | Destabilizing | None | N | 0.12 | neutral | N | 0.481523498 | None | None | I |
S/H | 0.2827 | likely_benign | 0.2569 | benign | -1.535 | Destabilizing | 0.38 | N | 0.515 | neutral | None | None | None | None | I |
S/I | 0.2137 | likely_benign | 0.1954 | benign | 0.371 | Stabilizing | 0.317 | N | 0.592 | neutral | D | 0.524890273 | None | None | I |
S/K | 0.6891 | likely_pathogenic | 0.6474 | pathogenic | -0.659 | Destabilizing | 0.081 | N | 0.364 | neutral | None | None | None | None | I |
S/L | 0.2127 | likely_benign | 0.1816 | benign | 0.371 | Stabilizing | 0.081 | N | 0.519 | neutral | None | None | None | None | I |
S/M | 0.2401 | likely_benign | 0.2204 | benign | 0.461 | Stabilizing | 0.935 | D | 0.491 | neutral | None | None | None | None | I |
S/N | 0.0722 | likely_benign | 0.0699 | benign | -1.091 | Destabilizing | None | N | 0.121 | neutral | N | 0.480752707 | None | None | I |
S/P | 0.8297 | likely_pathogenic | 0.8218 | pathogenic | 0.106 | Stabilizing | 0.555 | D | 0.557 | neutral | None | None | None | None | I |
S/Q | 0.4573 | ambiguous | 0.4203 | ambiguous | -0.92 | Destabilizing | 0.38 | N | 0.474 | neutral | None | None | None | None | I |
S/R | 0.6849 | likely_pathogenic | 0.6349 | pathogenic | -0.923 | Destabilizing | 0.317 | N | 0.554 | neutral | N | 0.4819075 | None | None | I |
S/T | 0.1088 | likely_benign | 0.1016 | benign | -0.785 | Destabilizing | None | N | 0.152 | neutral | N | 0.431246606 | None | None | I |
S/V | 0.2486 | likely_benign | 0.2342 | benign | 0.106 | Stabilizing | 0.081 | N | 0.562 | neutral | None | None | None | None | I |
S/W | 0.5918 | likely_pathogenic | 0.52 | ambiguous | -0.747 | Destabilizing | 0.935 | D | 0.619 | neutral | None | None | None | None | I |
S/Y | 0.3074 | likely_benign | 0.2553 | benign | -0.341 | Destabilizing | 0.791 | D | 0.589 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.