Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2760 | 8503;8504;8505 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
N2AB | 2760 | 8503;8504;8505 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
N2A | 2760 | 8503;8504;8505 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
N2B | 2714 | 8365;8366;8367 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
Novex-1 | 2714 | 8365;8366;8367 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
Novex-2 | 2714 | 8365;8366;8367 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
Novex-3 | 2760 | 8503;8504;8505 | chr2:178770514;178770513;178770512 | chr2:179635241;179635240;179635239 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.096 | D | 0.438 | 0.142 | 0.412715890961 | gnomAD-4.0.0 | 1.36814E-06 | None | None | None | None | N | None | 2.98686E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99295E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0866 | likely_benign | 0.09 | benign | -1.015 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.503698416 | None | None | N |
T/C | 0.3817 | ambiguous | 0.4149 | ambiguous | -0.585 | Destabilizing | 0.883 | D | 0.47 | neutral | None | None | None | None | N |
T/D | 0.2507 | likely_benign | 0.2602 | benign | -0.431 | Destabilizing | 0.124 | N | 0.448 | neutral | None | None | None | None | N |
T/E | 0.2699 | likely_benign | 0.3196 | benign | -0.317 | Destabilizing | 0.124 | N | 0.401 | neutral | None | None | None | None | N |
T/F | 0.3257 | likely_benign | 0.3481 | ambiguous | -0.728 | Destabilizing | 0.331 | N | 0.541 | neutral | None | None | None | None | N |
T/G | 0.2044 | likely_benign | 0.2153 | benign | -1.379 | Destabilizing | 0.124 | N | 0.51 | neutral | None | None | None | None | N |
T/H | 0.2441 | likely_benign | 0.2626 | benign | -1.475 | Destabilizing | 0.497 | N | 0.543 | neutral | None | None | None | None | N |
T/I | 0.2601 | likely_benign | 0.284 | benign | -0.094 | Destabilizing | 0.096 | N | 0.438 | neutral | D | 0.535698894 | None | None | N |
T/K | 0.1733 | likely_benign | 0.2189 | benign | -0.566 | Destabilizing | 0.001 | N | 0.283 | neutral | N | 0.485199111 | None | None | N |
T/L | 0.124 | likely_benign | 0.1305 | benign | -0.094 | Destabilizing | 0.001 | N | 0.227 | neutral | None | None | None | None | N |
T/M | 0.0985 | likely_benign | 0.1042 | benign | -0.013 | Destabilizing | 0.055 | N | 0.413 | neutral | None | None | None | None | N |
T/N | 0.0721 | likely_benign | 0.0636 | benign | -0.844 | Destabilizing | 0.002 | N | 0.195 | neutral | None | None | None | None | N |
T/P | 0.1496 | likely_benign | 0.1616 | benign | -0.368 | Destabilizing | 0.002 | N | 0.287 | neutral | N | 0.512624393 | None | None | N |
T/Q | 0.1972 | likely_benign | 0.2276 | benign | -0.786 | Destabilizing | 0.497 | N | 0.463 | neutral | None | None | None | None | N |
T/R | 0.1457 | likely_benign | 0.1914 | benign | -0.579 | Destabilizing | 0.096 | N | 0.45 | neutral | N | 0.488444825 | None | None | N |
T/S | 0.101 | likely_benign | 0.097 | benign | -1.181 | Destabilizing | 0.042 | N | 0.303 | neutral | N | 0.50662477 | None | None | N |
T/V | 0.1981 | likely_benign | 0.2053 | benign | -0.368 | Destabilizing | 0.055 | N | 0.279 | neutral | None | None | None | None | N |
T/W | 0.6347 | likely_pathogenic | 0.6785 | pathogenic | -0.725 | Destabilizing | 0.883 | D | 0.543 | neutral | None | None | None | None | N |
T/Y | 0.2955 | likely_benign | 0.3196 | benign | -0.437 | Destabilizing | 0.002 | N | 0.409 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.