Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27602 | 83029;83030;83031 | chr2:178563328;178563327;178563326 | chr2:179428055;179428054;179428053 |
N2AB | 25961 | 78106;78107;78108 | chr2:178563328;178563327;178563326 | chr2:179428055;179428054;179428053 |
N2A | 25034 | 75325;75326;75327 | chr2:178563328;178563327;178563326 | chr2:179428055;179428054;179428053 |
N2B | 18537 | 55834;55835;55836 | chr2:178563328;178563327;178563326 | chr2:179428055;179428054;179428053 |
Novex-1 | 18662 | 56209;56210;56211 | chr2:178563328;178563327;178563326 | chr2:179428055;179428054;179428053 |
Novex-2 | 18729 | 56410;56411;56412 | chr2:178563328;178563327;178563326 | chr2:179428055;179428054;179428053 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs886038821 | None | None | N | 0.245 | 0.094 | 0.226586394389 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs886038821 | None | None | N | 0.245 | 0.094 | 0.226586394389 | gnomAD-4.0.0 | 5.12538E-06 | None | None | None | None | I | None | 5.07477E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39331E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8217 | likely_pathogenic | 0.769 | pathogenic | -1.915 | Destabilizing | 0.104 | N | 0.635 | neutral | N | 0.512787767 | None | None | I |
V/C | 0.9246 | likely_pathogenic | 0.9149 | pathogenic | -1.119 | Destabilizing | 0.968 | D | 0.754 | deleterious | None | None | None | None | I |
V/D | 0.9861 | likely_pathogenic | 0.9779 | pathogenic | -2.156 | Highly Destabilizing | 0.667 | D | 0.83 | deleterious | N | 0.496106161 | None | None | I |
V/E | 0.9503 | likely_pathogenic | 0.9253 | pathogenic | -2.085 | Highly Destabilizing | 0.726 | D | 0.803 | deleterious | None | None | None | None | I |
V/F | 0.7204 | likely_pathogenic | 0.661 | pathogenic | -1.329 | Destabilizing | 0.497 | N | 0.775 | deleterious | N | 0.481839717 | None | None | I |
V/G | 0.8797 | likely_pathogenic | 0.8348 | pathogenic | -2.311 | Highly Destabilizing | 0.667 | D | 0.82 | deleterious | N | 0.496237897 | None | None | I |
V/H | 0.9858 | likely_pathogenic | 0.9811 | pathogenic | -1.974 | Destabilizing | 0.968 | D | 0.816 | deleterious | None | None | None | None | I |
V/I | 0.0676 | likely_benign | 0.0742 | benign | -0.876 | Destabilizing | None | N | 0.187 | neutral | N | 0.353473682 | None | None | I |
V/K | 0.9703 | likely_pathogenic | 0.9563 | pathogenic | -1.709 | Destabilizing | 0.726 | D | 0.802 | deleterious | None | None | None | None | I |
V/L | 0.3032 | likely_benign | 0.2744 | benign | -0.876 | Destabilizing | None | N | 0.245 | neutral | N | 0.477749687 | None | None | I |
V/M | 0.4377 | ambiguous | 0.3909 | ambiguous | -0.56 | Destabilizing | 0.567 | D | 0.669 | neutral | None | None | None | None | I |
V/N | 0.9435 | likely_pathogenic | 0.9245 | pathogenic | -1.568 | Destabilizing | 0.89 | D | 0.837 | deleterious | None | None | None | None | I |
V/P | 0.8663 | likely_pathogenic | 0.8551 | pathogenic | -1.192 | Destabilizing | 0.89 | D | 0.803 | deleterious | None | None | None | None | I |
V/Q | 0.9508 | likely_pathogenic | 0.9298 | pathogenic | -1.654 | Destabilizing | 0.89 | D | 0.811 | deleterious | None | None | None | None | I |
V/R | 0.9554 | likely_pathogenic | 0.9358 | pathogenic | -1.219 | Destabilizing | 0.726 | D | 0.835 | deleterious | None | None | None | None | I |
V/S | 0.9064 | likely_pathogenic | 0.866 | pathogenic | -2.079 | Highly Destabilizing | 0.726 | D | 0.799 | deleterious | None | None | None | None | I |
V/T | 0.8154 | likely_pathogenic | 0.7698 | pathogenic | -1.902 | Destabilizing | 0.272 | N | 0.668 | neutral | None | None | None | None | I |
V/W | 0.9865 | likely_pathogenic | 0.9828 | pathogenic | -1.684 | Destabilizing | 0.968 | D | 0.803 | deleterious | None | None | None | None | I |
V/Y | 0.9616 | likely_pathogenic | 0.9431 | pathogenic | -1.395 | Destabilizing | 0.726 | D | 0.771 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.