Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27606 | 83041;83042;83043 | chr2:178563316;178563315;178563314 | chr2:179428043;179428042;179428041 |
N2AB | 25965 | 78118;78119;78120 | chr2:178563316;178563315;178563314 | chr2:179428043;179428042;179428041 |
N2A | 25038 | 75337;75338;75339 | chr2:178563316;178563315;178563314 | chr2:179428043;179428042;179428041 |
N2B | 18541 | 55846;55847;55848 | chr2:178563316;178563315;178563314 | chr2:179428043;179428042;179428041 |
Novex-1 | 18666 | 56221;56222;56223 | chr2:178563316;178563315;178563314 | chr2:179428043;179428042;179428041 |
Novex-2 | 18733 | 56422;56423;56424 | chr2:178563316;178563315;178563314 | chr2:179428043;179428042;179428041 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1395661220 | -1.88 | 0.822 | N | 0.605 | 0.297 | 0.632854968478 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/I | rs777713575 | -0.319 | 0.006 | N | 0.243 | 0.038 | 0.288352970974 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2653 | likely_benign | 0.2709 | benign | -2.058 | Highly Destabilizing | 0.822 | D | 0.605 | neutral | N | 0.501933269 | None | None | N |
V/C | 0.6452 | likely_pathogenic | 0.6799 | pathogenic | -1.943 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/D | 0.7398 | likely_pathogenic | 0.7256 | pathogenic | -2.534 | Highly Destabilizing | 0.99 | D | 0.775 | deleterious | N | 0.52061503 | None | None | N |
V/E | 0.5055 | ambiguous | 0.5205 | ambiguous | -2.382 | Highly Destabilizing | 0.993 | D | 0.715 | prob.delet. | None | None | None | None | N |
V/F | 0.1703 | likely_benign | 0.1946 | benign | -1.286 | Destabilizing | 0.942 | D | 0.694 | prob.neutral | N | 0.499933113 | None | None | N |
V/G | 0.5123 | ambiguous | 0.4883 | ambiguous | -2.52 | Highly Destabilizing | 0.971 | D | 0.754 | deleterious | N | 0.494575148 | None | None | N |
V/H | 0.6017 | likely_pathogenic | 0.6524 | pathogenic | -2.055 | Highly Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
V/I | 0.061 | likely_benign | 0.0662 | benign | -0.801 | Destabilizing | 0.006 | N | 0.243 | neutral | N | 0.391477497 | None | None | N |
V/K | 0.4705 | ambiguous | 0.4994 | ambiguous | -1.665 | Destabilizing | 0.978 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/L | 0.1227 | likely_benign | 0.1542 | benign | -0.801 | Destabilizing | 0.247 | N | 0.469 | neutral | N | 0.441962245 | None | None | N |
V/M | 0.1032 | likely_benign | 0.1244 | benign | -1.047 | Destabilizing | 0.956 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/N | 0.4803 | ambiguous | 0.5233 | ambiguous | -1.862 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
V/P | 0.9799 | likely_pathogenic | 0.9774 | pathogenic | -1.191 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
V/Q | 0.4229 | ambiguous | 0.463 | ambiguous | -1.842 | Destabilizing | 0.993 | D | 0.742 | deleterious | None | None | None | None | N |
V/R | 0.3664 | ambiguous | 0.3912 | ambiguous | -1.36 | Destabilizing | 0.993 | D | 0.776 | deleterious | None | None | None | None | N |
V/S | 0.3334 | likely_benign | 0.3388 | benign | -2.487 | Highly Destabilizing | 0.978 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/T | 0.2016 | likely_benign | 0.2174 | benign | -2.204 | Highly Destabilizing | 0.86 | D | 0.63 | neutral | None | None | None | None | N |
V/W | 0.7394 | likely_pathogenic | 0.777 | pathogenic | -1.639 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/Y | 0.5203 | ambiguous | 0.558 | ambiguous | -1.309 | Destabilizing | 0.978 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.