Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27611 | 83056;83057;83058 | chr2:178563301;178563300;178563299 | chr2:179428028;179428027;179428026 |
N2AB | 25970 | 78133;78134;78135 | chr2:178563301;178563300;178563299 | chr2:179428028;179428027;179428026 |
N2A | 25043 | 75352;75353;75354 | chr2:178563301;178563300;178563299 | chr2:179428028;179428027;179428026 |
N2B | 18546 | 55861;55862;55863 | chr2:178563301;178563300;178563299 | chr2:179428028;179428027;179428026 |
Novex-1 | 18671 | 56236;56237;56238 | chr2:178563301;178563300;178563299 | chr2:179428028;179428027;179428026 |
Novex-2 | 18738 | 56437;56438;56439 | chr2:178563301;178563300;178563299 | chr2:179428028;179428027;179428026 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.001 | N | 0.229 | 0.053 | 0.276065633971 | gnomAD-4.0.0 | 1.59159E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85878E-06 | 0 | 0 |
E/G | None | None | 0.22 | N | 0.595 | 0.312 | 0.31077124679 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/Q | rs759363145 | -0.366 | 0.331 | N | 0.524 | 0.137 | 0.243972157842 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/Q | rs759363145 | -0.366 | 0.331 | N | 0.524 | 0.137 | 0.243972157842 | gnomAD-4.0.0 | 3.18315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71765E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1422 | likely_benign | 0.1377 | benign | -0.915 | Destabilizing | 0.124 | N | 0.539 | neutral | N | 0.499069109 | None | None | N |
E/C | 0.878 | likely_pathogenic | 0.873 | pathogenic | -0.475 | Destabilizing | 0.968 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/D | 0.1502 | likely_benign | 0.1494 | benign | -1.099 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.468727559 | None | None | N |
E/F | 0.855 | likely_pathogenic | 0.8462 | pathogenic | -0.271 | Destabilizing | 0.567 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/G | 0.2384 | likely_benign | 0.197 | benign | -1.289 | Destabilizing | 0.22 | N | 0.595 | neutral | N | 0.47325857 | None | None | N |
E/H | 0.6105 | likely_pathogenic | 0.5872 | pathogenic | -0.44 | Destabilizing | 0.909 | D | 0.547 | neutral | None | None | None | None | N |
E/I | 0.4104 | ambiguous | 0.3955 | ambiguous | 0.112 | Stabilizing | 0.003 | N | 0.459 | neutral | None | None | None | None | N |
E/K | 0.2201 | likely_benign | 0.1978 | benign | -0.606 | Destabilizing | 0.001 | N | 0.265 | neutral | N | 0.473074586 | None | None | N |
E/L | 0.3461 | ambiguous | 0.3406 | ambiguous | 0.112 | Stabilizing | 0.06 | N | 0.618 | neutral | None | None | None | None | N |
E/M | 0.4525 | ambiguous | 0.4466 | ambiguous | 0.545 | Stabilizing | 0.832 | D | 0.681 | prob.neutral | None | None | None | None | N |
E/N | 0.3118 | likely_benign | 0.3028 | benign | -1.148 | Destabilizing | 0.567 | D | 0.513 | neutral | None | None | None | None | N |
E/P | 0.3788 | ambiguous | 0.3615 | ambiguous | -0.209 | Destabilizing | 0.726 | D | 0.643 | neutral | None | None | None | None | N |
E/Q | 0.1888 | likely_benign | 0.1768 | benign | -0.998 | Destabilizing | 0.331 | N | 0.524 | neutral | N | 0.472116027 | None | None | N |
E/R | 0.3838 | ambiguous | 0.3467 | ambiguous | -0.257 | Destabilizing | 0.396 | N | 0.525 | neutral | None | None | None | None | N |
E/S | 0.2788 | likely_benign | 0.2635 | benign | -1.454 | Destabilizing | 0.157 | N | 0.46 | neutral | None | None | None | None | N |
E/T | 0.2877 | likely_benign | 0.2702 | benign | -1.14 | Destabilizing | 0.272 | N | 0.558 | neutral | None | None | None | None | N |
E/V | 0.2167 | likely_benign | 0.2055 | benign | -0.209 | Destabilizing | 0.046 | N | 0.585 | neutral | N | 0.482475282 | None | None | N |
E/W | 0.9445 | likely_pathogenic | 0.9395 | pathogenic | 0.021 | Stabilizing | 0.968 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/Y | 0.7638 | likely_pathogenic | 0.7476 | pathogenic | -0.006 | Destabilizing | 0.726 | D | 0.708 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.