Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27619 | 83080;83081;83082 | chr2:178563277;178563276;178563275 | chr2:179428004;179428003;179428002 |
N2AB | 25978 | 78157;78158;78159 | chr2:178563277;178563276;178563275 | chr2:179428004;179428003;179428002 |
N2A | 25051 | 75376;75377;75378 | chr2:178563277;178563276;178563275 | chr2:179428004;179428003;179428002 |
N2B | 18554 | 55885;55886;55887 | chr2:178563277;178563276;178563275 | chr2:179428004;179428003;179428002 |
Novex-1 | 18679 | 56260;56261;56262 | chr2:178563277;178563276;178563275 | chr2:179428004;179428003;179428002 |
Novex-2 | 18746 | 56461;56462;56463 | chr2:178563277;178563276;178563275 | chr2:179428004;179428003;179428002 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1704351645 | None | 0.334 | N | 0.366 | 0.103 | 0.146414634003 | gnomAD-4.0.0 | 4.77449E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.32732E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0637 | likely_benign | 0.0694 | benign | -0.583 | Destabilizing | 0.334 | N | 0.366 | neutral | N | 0.468399485 | None | None | N |
T/C | 0.2626 | likely_benign | 0.3202 | benign | -0.292 | Destabilizing | 0.992 | D | 0.583 | neutral | None | None | None | None | N |
T/D | 0.4061 | ambiguous | 0.4658 | ambiguous | -0.317 | Destabilizing | 0.92 | D | 0.602 | neutral | None | None | None | None | N |
T/E | 0.2623 | likely_benign | 0.3216 | benign | -0.376 | Destabilizing | 0.617 | D | 0.564 | neutral | None | None | None | None | N |
T/F | 0.1346 | likely_benign | 0.1685 | benign | -0.924 | Destabilizing | 0.85 | D | 0.638 | neutral | None | None | None | None | N |
T/G | 0.2074 | likely_benign | 0.2463 | benign | -0.765 | Destabilizing | 0.617 | D | 0.561 | neutral | None | None | None | None | N |
T/H | 0.2287 | likely_benign | 0.2738 | benign | -1.149 | Destabilizing | 0.977 | D | 0.595 | neutral | None | None | None | None | N |
T/I | 0.0551 | likely_benign | 0.0664 | benign | -0.21 | Destabilizing | 0.002 | N | 0.224 | neutral | N | 0.43307619 | None | None | N |
T/K | 0.1633 | likely_benign | 0.1936 | benign | -0.635 | Destabilizing | 0.447 | N | 0.513 | neutral | None | None | None | None | N |
T/L | 0.0503 | likely_benign | 0.0585 | benign | -0.21 | Destabilizing | 0.048 | N | 0.339 | neutral | None | None | None | None | N |
T/M | 0.0647 | likely_benign | 0.0757 | benign | 0.2 | Stabilizing | 0.127 | N | 0.322 | neutral | None | None | None | None | N |
T/N | 0.1282 | likely_benign | 0.1498 | benign | -0.427 | Destabilizing | 0.81 | D | 0.505 | neutral | N | 0.46489782 | None | None | N |
T/P | 0.0754 | likely_benign | 0.0797 | benign | -0.305 | Destabilizing | 0.963 | D | 0.629 | neutral | N | 0.434980345 | None | None | N |
T/Q | 0.1765 | likely_benign | 0.2143 | benign | -0.721 | Destabilizing | 0.85 | D | 0.629 | neutral | None | None | None | None | N |
T/R | 0.132 | likely_benign | 0.1475 | benign | -0.307 | Destabilizing | 0.005 | N | 0.303 | neutral | None | None | None | None | N |
T/S | 0.1007 | likely_benign | 0.1154 | benign | -0.629 | Destabilizing | 0.549 | D | 0.411 | neutral | N | 0.472477153 | None | None | N |
T/V | 0.053 | likely_benign | 0.0642 | benign | -0.305 | Destabilizing | 0.009 | N | 0.138 | neutral | None | None | None | None | N |
T/W | 0.4749 | ambiguous | 0.5427 | ambiguous | -0.875 | Destabilizing | 0.992 | D | 0.615 | neutral | None | None | None | None | N |
T/Y | 0.2052 | likely_benign | 0.2382 | benign | -0.631 | Destabilizing | 0.92 | D | 0.622 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.