Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2762 | 8509;8510;8511 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
N2AB | 2762 | 8509;8510;8511 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
N2A | 2762 | 8509;8510;8511 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
N2B | 2716 | 8371;8372;8373 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
Novex-1 | 2716 | 8371;8372;8373 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
Novex-2 | 2716 | 8371;8372;8373 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
Novex-3 | 2762 | 8509;8510;8511 | chr2:178770508;178770507;178770506 | chr2:179635235;179635234;179635233 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1553995474 | None | 0.993 | N | 0.695 | 0.753 | 0.728573421076 | gnomAD-4.0.0 | 3.18101E-06 | None | None | None | None | N | None | 5.65163E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
Y/H | None | None | 0.001 | N | 0.312 | 0.389 | 0.321951552304 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5927 | likely_pathogenic | 0.7252 | pathogenic | -2.521 | Highly Destabilizing | 0.495 | N | 0.677 | prob.neutral | None | None | None | None | N |
Y/C | 0.1186 | likely_benign | 0.1576 | benign | -1.771 | Destabilizing | 0.993 | D | 0.695 | prob.neutral | N | 0.512062918 | None | None | N |
Y/D | 0.7159 | likely_pathogenic | 0.871 | pathogenic | -2.603 | Highly Destabilizing | 0.642 | D | 0.711 | prob.delet. | N | 0.510450919 | None | None | N |
Y/E | 0.8243 | likely_pathogenic | 0.9208 | pathogenic | -2.36 | Highly Destabilizing | 0.329 | N | 0.69 | prob.neutral | None | None | None | None | N |
Y/F | 0.1325 | likely_benign | 0.1453 | benign | -0.764 | Destabilizing | 0.784 | D | 0.631 | neutral | N | 0.516142335 | None | None | N |
Y/G | 0.6569 | likely_pathogenic | 0.7868 | pathogenic | -2.98 | Highly Destabilizing | 0.495 | N | 0.689 | prob.neutral | None | None | None | None | N |
Y/H | 0.0984 | likely_benign | 0.153 | benign | -1.894 | Destabilizing | 0.001 | N | 0.312 | neutral | N | 0.357747074 | None | None | N |
Y/I | 0.5766 | likely_pathogenic | 0.7074 | pathogenic | -1.015 | Destabilizing | 0.828 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/K | 0.7837 | likely_pathogenic | 0.8893 | pathogenic | -1.855 | Destabilizing | 0.329 | N | 0.675 | prob.neutral | None | None | None | None | N |
Y/L | 0.5186 | ambiguous | 0.6269 | pathogenic | -1.015 | Destabilizing | 0.495 | N | 0.669 | neutral | None | None | None | None | N |
Y/M | 0.7692 | likely_pathogenic | 0.8342 | pathogenic | -1.077 | Destabilizing | 0.981 | D | 0.693 | prob.neutral | None | None | None | None | N |
Y/N | 0.3063 | likely_benign | 0.4653 | ambiguous | -2.678 | Highly Destabilizing | 0.642 | D | 0.691 | prob.neutral | N | 0.510982371 | None | None | N |
Y/P | 0.9494 | likely_pathogenic | 0.9791 | pathogenic | -1.531 | Destabilizing | 0.936 | D | 0.739 | prob.delet. | None | None | None | None | N |
Y/Q | 0.5065 | ambiguous | 0.6718 | pathogenic | -2.292 | Highly Destabilizing | 0.037 | N | 0.503 | neutral | None | None | None | None | N |
Y/R | 0.472 | ambiguous | 0.6424 | pathogenic | -1.942 | Destabilizing | 0.704 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/S | 0.2773 | likely_benign | 0.412 | ambiguous | -3.131 | Highly Destabilizing | 0.425 | N | 0.673 | neutral | N | 0.510836456 | None | None | N |
Y/T | 0.5396 | ambiguous | 0.6809 | pathogenic | -2.745 | Highly Destabilizing | 0.828 | D | 0.702 | prob.neutral | None | None | None | None | N |
Y/V | 0.4597 | ambiguous | 0.5769 | pathogenic | -1.531 | Destabilizing | 0.828 | D | 0.704 | prob.neutral | None | None | None | None | N |
Y/W | 0.4771 | ambiguous | 0.5157 | ambiguous | -0.028 | Destabilizing | 0.981 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.