Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27622 | 83089;83090;83091 | chr2:178563268;178563267;178563266 | chr2:179427995;179427994;179427993 |
N2AB | 25981 | 78166;78167;78168 | chr2:178563268;178563267;178563266 | chr2:179427995;179427994;179427993 |
N2A | 25054 | 75385;75386;75387 | chr2:178563268;178563267;178563266 | chr2:179427995;179427994;179427993 |
N2B | 18557 | 55894;55895;55896 | chr2:178563268;178563267;178563266 | chr2:179427995;179427994;179427993 |
Novex-1 | 18682 | 56269;56270;56271 | chr2:178563268;178563267;178563266 | chr2:179427995;179427994;179427993 |
Novex-2 | 18749 | 56470;56471;56472 | chr2:178563268;178563267;178563266 | chr2:179427995;179427994;179427993 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs769189431 | -1.124 | 0.988 | N | 0.713 | 0.366 | 0.376393476264 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.24018E-04 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/T | rs769189431 | -1.124 | 0.988 | N | 0.713 | 0.366 | 0.376393476264 | gnomAD-3.1.2 | 6.58E-05 | None | None | None | None | N | None | 2.41383E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs769189431 | -1.124 | 0.988 | N | 0.713 | 0.366 | 0.376393476264 | gnomAD-4.0.0 | 9.91618E-06 | None | None | None | None | N | None | 1.86936E-04 | 3.33511E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1242 | likely_benign | 0.1338 | benign | -0.587 | Destabilizing | 0.958 | D | 0.589 | neutral | N | 0.496794021 | None | None | N |
P/C | 0.6877 | likely_pathogenic | 0.7081 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
P/D | 0.6601 | likely_pathogenic | 0.6745 | pathogenic | -0.174 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
P/E | 0.4447 | ambiguous | 0.4566 | ambiguous | -0.264 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
P/F | 0.5968 | likely_pathogenic | 0.6291 | pathogenic | -0.687 | Destabilizing | 0.998 | D | 0.781 | deleterious | None | None | None | None | N |
P/G | 0.4562 | ambiguous | 0.4741 | ambiguous | -0.752 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
P/H | 0.3366 | likely_benign | 0.3521 | ambiguous | -0.258 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
P/I | 0.4068 | ambiguous | 0.4353 | ambiguous | -0.291 | Destabilizing | 0.982 | D | 0.741 | deleterious | None | None | None | None | N |
P/K | 0.4572 | ambiguous | 0.4685 | ambiguous | -0.489 | Destabilizing | 0.995 | D | 0.754 | deleterious | None | None | None | None | N |
P/L | 0.1427 | likely_benign | 0.1539 | benign | -0.291 | Destabilizing | 0.142 | N | 0.511 | neutral | N | 0.492521565 | None | None | N |
P/M | 0.3803 | ambiguous | 0.4123 | ambiguous | -0.378 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
P/N | 0.5088 | ambiguous | 0.5421 | ambiguous | -0.244 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
P/Q | 0.2729 | likely_benign | 0.2824 | benign | -0.445 | Destabilizing | 0.998 | D | 0.785 | deleterious | N | 0.519710953 | None | None | N |
P/R | 0.3629 | ambiguous | 0.3592 | ambiguous | 0.003 | Stabilizing | 0.994 | D | 0.779 | deleterious | N | 0.518670803 | None | None | N |
P/S | 0.1839 | likely_benign | 0.1979 | benign | -0.668 | Destabilizing | 0.994 | D | 0.751 | deleterious | N | 0.46935949 | None | None | N |
P/T | 0.1813 | likely_benign | 0.1892 | benign | -0.647 | Destabilizing | 0.988 | D | 0.713 | prob.delet. | N | 0.46533775 | None | None | N |
P/V | 0.2856 | likely_benign | 0.3039 | benign | -0.354 | Destabilizing | 0.982 | D | 0.698 | prob.neutral | None | None | None | None | N |
P/W | 0.8182 | likely_pathogenic | 0.8143 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
P/Y | 0.5952 | likely_pathogenic | 0.6153 | pathogenic | -0.476 | Destabilizing | 0.999 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.