Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27624 | 83095;83096;83097 | chr2:178563262;178563261;178563260 | chr2:179427989;179427988;179427987 |
N2AB | 25983 | 78172;78173;78174 | chr2:178563262;178563261;178563260 | chr2:179427989;179427988;179427987 |
N2A | 25056 | 75391;75392;75393 | chr2:178563262;178563261;178563260 | chr2:179427989;179427988;179427987 |
N2B | 18559 | 55900;55901;55902 | chr2:178563262;178563261;178563260 | chr2:179427989;179427988;179427987 |
Novex-1 | 18684 | 56275;56276;56277 | chr2:178563262;178563261;178563260 | chr2:179427989;179427988;179427987 |
Novex-2 | 18751 | 56476;56477;56478 | chr2:178563262;178563261;178563260 | chr2:179427989;179427988;179427987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1001331770 | None | 0.497 | N | 0.423 | 0.315 | 0.353974658523 | gnomAD-4.0.0 | 1.59145E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0603 | likely_benign | 0.0639 | benign | -0.208 | Destabilizing | 0.055 | N | 0.447 | neutral | N | 0.447578709 | None | None | I |
T/C | 0.334 | likely_benign | 0.3579 | ambiguous | -0.24 | Destabilizing | 0.909 | D | 0.473 | neutral | None | None | None | None | I |
T/D | 0.2592 | likely_benign | 0.2977 | benign | 0.122 | Stabilizing | 0.157 | N | 0.44 | neutral | None | None | None | None | I |
T/E | 0.2167 | likely_benign | 0.2418 | benign | 0.028 | Stabilizing | 0.157 | N | 0.435 | neutral | None | None | None | None | I |
T/F | 0.2082 | likely_benign | 0.2216 | benign | -0.852 | Destabilizing | 0.726 | D | 0.54 | neutral | None | None | None | None | I |
T/G | 0.1354 | likely_benign | 0.1588 | benign | -0.277 | Destabilizing | 0.001 | N | 0.297 | neutral | None | None | None | None | I |
T/H | 0.2169 | likely_benign | 0.2362 | benign | -0.515 | Destabilizing | 0.909 | D | 0.544 | neutral | None | None | None | None | I |
T/I | 0.192 | likely_benign | 0.1978 | benign | -0.15 | Destabilizing | 0.497 | N | 0.423 | neutral | N | 0.476594894 | None | None | I |
T/K | 0.1785 | likely_benign | 0.1889 | benign | -0.22 | Destabilizing | 0.331 | N | 0.423 | neutral | N | 0.489425331 | None | None | I |
T/L | 0.0937 | likely_benign | 0.094 | benign | -0.15 | Destabilizing | 0.272 | N | 0.463 | neutral | None | None | None | None | I |
T/M | 0.0906 | likely_benign | 0.0896 | benign | -0.052 | Destabilizing | 0.968 | D | 0.442 | neutral | None | None | None | None | I |
T/N | 0.1054 | likely_benign | 0.1178 | benign | 0.011 | Stabilizing | 0.157 | N | 0.4 | neutral | None | None | None | None | I |
T/P | 0.1274 | likely_benign | 0.1274 | benign | -0.145 | Destabilizing | 0.497 | N | 0.427 | neutral | N | 0.511320756 | None | None | I |
T/Q | 0.1839 | likely_benign | 0.1948 | benign | -0.222 | Destabilizing | 0.567 | D | 0.415 | neutral | None | None | None | None | I |
T/R | 0.1607 | likely_benign | 0.165 | benign | 0.048 | Stabilizing | 0.497 | N | 0.421 | neutral | N | 0.482016569 | None | None | I |
T/S | 0.0783 | likely_benign | 0.0875 | benign | -0.169 | Destabilizing | 0.001 | N | 0.17 | neutral | N | 0.474687952 | None | None | I |
T/V | 0.125 | likely_benign | 0.1279 | benign | -0.145 | Destabilizing | 0.272 | N | 0.424 | neutral | None | None | None | None | I |
T/W | 0.4823 | ambiguous | 0.5054 | ambiguous | -0.91 | Destabilizing | 0.968 | D | 0.639 | neutral | None | None | None | None | I |
T/Y | 0.2475 | likely_benign | 0.2686 | benign | -0.594 | Destabilizing | 0.726 | D | 0.542 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.