Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27628 | 83107;83108;83109 | chr2:178563250;178563249;178563248 | chr2:179427977;179427976;179427975 |
N2AB | 25987 | 78184;78185;78186 | chr2:178563250;178563249;178563248 | chr2:179427977;179427976;179427975 |
N2A | 25060 | 75403;75404;75405 | chr2:178563250;178563249;178563248 | chr2:179427977;179427976;179427975 |
N2B | 18563 | 55912;55913;55914 | chr2:178563250;178563249;178563248 | chr2:179427977;179427976;179427975 |
Novex-1 | 18688 | 56287;56288;56289 | chr2:178563250;178563249;178563248 | chr2:179427977;179427976;179427975 |
Novex-2 | 18755 | 56488;56489;56490 | chr2:178563250;178563249;178563248 | chr2:179427977;179427976;179427975 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs773909467 | -0.312 | 0.984 | N | 0.689 | 0.281 | 0.456089687795 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0949 | likely_benign | 0.0973 | benign | -0.412 | Destabilizing | 0.011 | N | 0.251 | neutral | N | 0.406884092 | None | None | N |
G/C | 0.1821 | likely_benign | 0.1872 | benign | -0.456 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
G/D | 0.215 | likely_benign | 0.2088 | benign | -0.911 | Destabilizing | 0.976 | D | 0.583 | neutral | None | None | None | None | N |
G/E | 0.1948 | likely_benign | 0.1836 | benign | -0.866 | Destabilizing | 0.968 | D | 0.643 | neutral | N | 0.421736115 | None | None | N |
G/F | 0.5262 | ambiguous | 0.5463 | ambiguous | -0.618 | Destabilizing | 0.988 | D | 0.715 | prob.delet. | None | None | None | None | N |
G/H | 0.3662 | ambiguous | 0.3727 | ambiguous | -1.011 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
G/I | 0.223 | likely_benign | 0.2324 | benign | 0.182 | Stabilizing | 0.976 | D | 0.707 | prob.neutral | None | None | None | None | N |
G/K | 0.3812 | ambiguous | 0.3616 | ambiguous | -0.747 | Destabilizing | 0.976 | D | 0.641 | neutral | None | None | None | None | N |
G/L | 0.2943 | likely_benign | 0.2963 | benign | 0.182 | Stabilizing | 0.919 | D | 0.651 | neutral | None | None | None | None | N |
G/M | 0.3391 | likely_benign | 0.3507 | ambiguous | -0.037 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
G/N | 0.2009 | likely_benign | 0.2079 | benign | -0.625 | Destabilizing | 0.976 | D | 0.516 | neutral | None | None | None | None | N |
G/P | 0.6757 | likely_pathogenic | 0.6955 | pathogenic | 0.025 | Stabilizing | 0.988 | D | 0.682 | prob.neutral | None | None | None | None | N |
G/Q | 0.2931 | likely_benign | 0.2861 | benign | -0.646 | Destabilizing | 0.988 | D | 0.68 | prob.neutral | None | None | None | None | N |
G/R | 0.3357 | likely_benign | 0.3222 | benign | -0.649 | Destabilizing | 0.984 | D | 0.689 | prob.neutral | N | 0.46820191 | None | None | N |
G/S | 0.0927 | likely_benign | 0.0984 | benign | -0.91 | Destabilizing | 0.307 | N | 0.274 | neutral | None | None | None | None | N |
G/T | 0.1205 | likely_benign | 0.1309 | benign | -0.761 | Destabilizing | 0.851 | D | 0.619 | neutral | None | None | None | None | N |
G/V | 0.1344 | likely_benign | 0.1446 | benign | 0.025 | Stabilizing | 0.811 | D | 0.653 | neutral | N | 0.441900743 | None | None | N |
G/W | 0.43 | ambiguous | 0.4205 | ambiguous | -1.123 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
G/Y | 0.3818 | ambiguous | 0.3995 | ambiguous | -0.559 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.