Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27635 | 83128;83129;83130 | chr2:178563229;178563228;178563227 | chr2:179427956;179427955;179427954 |
N2AB | 25994 | 78205;78206;78207 | chr2:178563229;178563228;178563227 | chr2:179427956;179427955;179427954 |
N2A | 25067 | 75424;75425;75426 | chr2:178563229;178563228;178563227 | chr2:179427956;179427955;179427954 |
N2B | 18570 | 55933;55934;55935 | chr2:178563229;178563228;178563227 | chr2:179427956;179427955;179427954 |
Novex-1 | 18695 | 56308;56309;56310 | chr2:178563229;178563228;178563227 | chr2:179427956;179427955;179427954 |
Novex-2 | 18762 | 56509;56510;56511 | chr2:178563229;178563228;178563227 | chr2:179427956;179427955;179427954 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | None | N | 0.267 | 0.075 | 0.19670166235 | gnomAD-4.0.0 | 3.18283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71749E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1429 | likely_benign | 0.14 | benign | -0.048 | Destabilizing | 0.035 | N | 0.381 | neutral | None | None | None | None | N |
K/C | 0.4596 | ambiguous | 0.4985 | ambiguous | -0.522 | Destabilizing | 0.935 | D | 0.459 | neutral | None | None | None | None | N |
K/D | 0.1829 | likely_benign | 0.1635 | benign | -0.182 | Destabilizing | 0.081 | N | 0.426 | neutral | None | None | None | None | N |
K/E | 0.1116 | likely_benign | 0.098 | benign | -0.199 | Destabilizing | None | N | 0.267 | neutral | N | 0.490158837 | None | None | N |
K/F | 0.6467 | likely_pathogenic | 0.6593 | pathogenic | -0.42 | Destabilizing | 0.555 | D | 0.472 | neutral | None | None | None | None | N |
K/G | 0.1383 | likely_benign | 0.1419 | benign | -0.161 | Destabilizing | 0.081 | N | 0.419 | neutral | None | None | None | None | N |
K/H | 0.1623 | likely_benign | 0.1722 | benign | -0.255 | Destabilizing | 0.001 | N | 0.427 | neutral | None | None | None | None | N |
K/I | 0.3847 | ambiguous | 0.3601 | ambiguous | 0.163 | Stabilizing | 0.555 | D | 0.487 | neutral | None | None | None | None | N |
K/L | 0.2683 | likely_benign | 0.2615 | benign | 0.163 | Stabilizing | 0.149 | N | 0.46 | neutral | None | None | None | None | N |
K/M | 0.1929 | likely_benign | 0.1854 | benign | -0.118 | Destabilizing | 0.78 | D | 0.439 | neutral | N | 0.501109288 | None | None | N |
K/N | 0.1316 | likely_benign | 0.1296 | benign | -0.06 | Destabilizing | None | N | 0.288 | neutral | N | 0.404846652 | None | None | N |
K/P | 0.4991 | ambiguous | 0.4541 | ambiguous | 0.115 | Stabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
K/Q | 0.0892 | likely_benign | 0.0918 | benign | -0.199 | Destabilizing | 0.004 | N | 0.315 | neutral | N | 0.518596232 | None | None | N |
K/R | 0.0821 | likely_benign | 0.0855 | benign | -0.136 | Destabilizing | 0.062 | N | 0.397 | neutral | N | 0.47432538 | None | None | N |
K/S | 0.1482 | likely_benign | 0.1451 | benign | -0.455 | Destabilizing | 0.002 | N | 0.291 | neutral | None | None | None | None | N |
K/T | 0.1096 | likely_benign | 0.1032 | benign | -0.356 | Destabilizing | 0.062 | N | 0.439 | neutral | N | 0.470977164 | None | None | N |
K/V | 0.2745 | likely_benign | 0.2543 | benign | 0.115 | Stabilizing | 0.38 | N | 0.463 | neutral | None | None | None | None | N |
K/W | 0.6555 | likely_pathogenic | 0.6785 | pathogenic | -0.512 | Destabilizing | 0.935 | D | 0.537 | neutral | None | None | None | None | N |
K/Y | 0.4296 | ambiguous | 0.439 | ambiguous | -0.158 | Destabilizing | 0.38 | N | 0.475 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.