Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2764 | 8515;8516;8517 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
N2AB | 2764 | 8515;8516;8517 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
N2A | 2764 | 8515;8516;8517 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
N2B | 2718 | 8377;8378;8379 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
Novex-1 | 2718 | 8377;8378;8379 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
Novex-2 | 2718 | 8377;8378;8379 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
Novex-3 | 2764 | 8515;8516;8517 | chr2:178770502;178770501;178770500 | chr2:179635229;179635228;179635227 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs2091305777 | None | 0.885 | D | 0.658 | 0.538 | 0.863069828929 | gnomAD-4.0.0 | 4.10441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39576E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9403 | likely_pathogenic | 0.9654 | pathogenic | -2.165 | Highly Destabilizing | 0.91 | D | 0.744 | deleterious | None | None | None | None | N |
L/C | 0.907 | likely_pathogenic | 0.9396 | pathogenic | -1.249 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9998 | pathogenic | -2.797 | Highly Destabilizing | 0.986 | D | 0.881 | deleterious | None | None | None | None | N |
L/E | 0.9966 | likely_pathogenic | 0.9984 | pathogenic | -2.46 | Highly Destabilizing | 0.986 | D | 0.879 | deleterious | None | None | None | None | N |
L/F | 0.6654 | likely_pathogenic | 0.7633 | pathogenic | -1.31 | Destabilizing | 0.986 | D | 0.653 | neutral | None | None | None | None | N |
L/G | 0.9893 | likely_pathogenic | 0.9943 | pathogenic | -2.777 | Highly Destabilizing | 0.986 | D | 0.869 | deleterious | None | None | None | None | N |
L/H | 0.9888 | likely_pathogenic | 0.9941 | pathogenic | -2.778 | Highly Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
L/I | 0.3006 | likely_benign | 0.4331 | ambiguous | -0.321 | Destabilizing | 0.91 | D | 0.644 | neutral | None | None | None | None | N |
L/K | 0.9942 | likely_pathogenic | 0.9967 | pathogenic | -1.477 | Destabilizing | 0.986 | D | 0.842 | deleterious | None | None | None | None | N |
L/M | 0.366 | ambiguous | 0.451 | ambiguous | -0.535 | Destabilizing | 0.58 | D | 0.383 | neutral | D | 0.65908345 | None | None | N |
L/N | 0.9965 | likely_pathogenic | 0.9982 | pathogenic | -2.257 | Highly Destabilizing | 0.986 | D | 0.881 | deleterious | None | None | None | None | N |
L/P | 0.998 | likely_pathogenic | 0.9991 | pathogenic | -0.928 | Destabilizing | 0.991 | D | 0.884 | deleterious | D | 0.691425704 | None | None | N |
L/Q | 0.9815 | likely_pathogenic | 0.9905 | pathogenic | -1.789 | Destabilizing | 0.991 | D | 0.857 | deleterious | D | 0.691425704 | None | None | N |
L/R | 0.9856 | likely_pathogenic | 0.9917 | pathogenic | -1.891 | Destabilizing | 0.991 | D | 0.865 | deleterious | D | 0.691425704 | None | None | N |
L/S | 0.992 | likely_pathogenic | 0.9965 | pathogenic | -2.73 | Highly Destabilizing | 0.973 | D | 0.835 | deleterious | None | None | None | None | N |
L/T | 0.9762 | likely_pathogenic | 0.9884 | pathogenic | -2.213 | Highly Destabilizing | 0.386 | N | 0.606 | neutral | None | None | None | None | N |
L/V | 0.3577 | ambiguous | 0.4812 | ambiguous | -0.928 | Destabilizing | 0.885 | D | 0.658 | neutral | D | 0.691677282 | None | None | N |
L/W | 0.9776 | likely_pathogenic | 0.9887 | pathogenic | -1.673 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
L/Y | 0.9772 | likely_pathogenic | 0.9872 | pathogenic | -1.439 | Destabilizing | 0.993 | D | 0.758 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.