Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27650 | 83173;83174;83175 | chr2:178563184;178563183;178563182 | chr2:179427911;179427910;179427909 |
N2AB | 26009 | 78250;78251;78252 | chr2:178563184;178563183;178563182 | chr2:179427911;179427910;179427909 |
N2A | 25082 | 75469;75470;75471 | chr2:178563184;178563183;178563182 | chr2:179427911;179427910;179427909 |
N2B | 18585 | 55978;55979;55980 | chr2:178563184;178563183;178563182 | chr2:179427911;179427910;179427909 |
Novex-1 | 18710 | 56353;56354;56355 | chr2:178563184;178563183;178563182 | chr2:179427911;179427910;179427909 |
Novex-2 | 18777 | 56554;56555;56556 | chr2:178563184;178563183;178563182 | chr2:179427911;179427910;179427909 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs750669364 | -0.356 | 0.919 | N | 0.605 | 0.321 | 0.230578612272 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.56E-05 | 0 |
N/K | rs750669364 | -0.356 | 0.919 | N | 0.605 | 0.321 | 0.230578612272 | gnomAD-4.0.0 | 1.43224E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88232E-05 | 0 | 1.71526E-05 | 0 | 6.04924E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9918 | likely_pathogenic | 0.9894 | pathogenic | -0.363 | Destabilizing | 0.968 | D | 0.767 | deleterious | None | None | None | None | N |
N/C | 0.9507 | likely_pathogenic | 0.9343 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
N/D | 0.9848 | likely_pathogenic | 0.9828 | pathogenic | -2.181 | Highly Destabilizing | 0.979 | D | 0.633 | neutral | D | 0.531271546 | None | None | N |
N/E | 0.9985 | likely_pathogenic | 0.9984 | pathogenic | -2.01 | Highly Destabilizing | 0.968 | D | 0.658 | neutral | None | None | None | None | N |
N/F | 0.9988 | likely_pathogenic | 0.9987 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
N/G | 0.9754 | likely_pathogenic | 0.9715 | pathogenic | -0.685 | Destabilizing | 0.968 | D | 0.589 | neutral | None | None | None | None | N |
N/H | 0.9649 | likely_pathogenic | 0.9543 | pathogenic | -0.535 | Destabilizing | 0.994 | D | 0.696 | prob.neutral | D | 0.561746064 | None | None | N |
N/I | 0.9896 | likely_pathogenic | 0.9876 | pathogenic | 0.453 | Stabilizing | 0.994 | D | 0.828 | deleterious | D | 0.550896738 | None | None | N |
N/K | 0.9983 | likely_pathogenic | 0.998 | pathogenic | -0.119 | Destabilizing | 0.919 | D | 0.605 | neutral | N | 0.517535384 | None | None | N |
N/L | 0.959 | likely_pathogenic | 0.9508 | pathogenic | 0.453 | Stabilizing | 0.991 | D | 0.815 | deleterious | None | None | None | None | N |
N/M | 0.9934 | likely_pathogenic | 0.9916 | pathogenic | 0.614 | Stabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
N/P | 0.9953 | likely_pathogenic | 0.9942 | pathogenic | 0.21 | Stabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
N/Q | 0.9975 | likely_pathogenic | 0.997 | pathogenic | -0.986 | Destabilizing | 0.991 | D | 0.763 | deleterious | None | None | None | None | N |
N/R | 0.9947 | likely_pathogenic | 0.9943 | pathogenic | -0.211 | Destabilizing | 0.18 | N | 0.359 | neutral | None | None | None | None | N |
N/S | 0.6157 | likely_pathogenic | 0.5412 | ambiguous | -0.909 | Destabilizing | 0.958 | D | 0.59 | neutral | N | 0.514746999 | None | None | N |
N/T | 0.9269 | likely_pathogenic | 0.8976 | pathogenic | -0.588 | Destabilizing | 0.958 | D | 0.675 | prob.neutral | N | 0.507564068 | None | None | N |
N/V | 0.9878 | likely_pathogenic | 0.9851 | pathogenic | 0.21 | Stabilizing | 0.995 | D | 0.831 | deleterious | None | None | None | None | N |
N/W | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
N/Y | 0.991 | likely_pathogenic | 0.9894 | pathogenic | 0.129 | Stabilizing | 0.998 | D | 0.839 | deleterious | D | 0.561999554 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.