Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27654 | 83185;83186;83187 | chr2:178563172;178563171;178563170 | chr2:179427899;179427898;179427897 |
N2AB | 26013 | 78262;78263;78264 | chr2:178563172;178563171;178563170 | chr2:179427899;179427898;179427897 |
N2A | 25086 | 75481;75482;75483 | chr2:178563172;178563171;178563170 | chr2:179427899;179427898;179427897 |
N2B | 18589 | 55990;55991;55992 | chr2:178563172;178563171;178563170 | chr2:179427899;179427898;179427897 |
Novex-1 | 18714 | 56365;56366;56367 | chr2:178563172;178563171;178563170 | chr2:179427899;179427898;179427897 |
Novex-2 | 18781 | 56566;56567;56568 | chr2:178563172;178563171;178563170 | chr2:179427899;179427898;179427897 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1027584774 | None | 0.014 | N | 0.323 | 0.067 | 0.254761474806 | gnomAD-4.0.0 | 6.36557E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.54539E-05 | None | 0 | 0 | 0 | 0 | 6.04887E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.125 | likely_benign | 0.1364 | benign | -0.731 | Destabilizing | 0.058 | N | 0.384 | neutral | N | 0.492502922 | None | None | I |
V/C | 0.6787 | likely_pathogenic | 0.7129 | pathogenic | -0.69 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | I |
V/D | 0.4563 | ambiguous | 0.47 | ambiguous | -0.314 | Destabilizing | 0.978 | D | 0.815 | deleterious | None | None | None | None | I |
V/E | 0.2954 | likely_benign | 0.3077 | benign | -0.415 | Destabilizing | 0.97 | D | 0.811 | deleterious | N | 0.501871767 | None | None | I |
V/F | 0.1517 | likely_benign | 0.158 | benign | -0.832 | Destabilizing | 0.956 | D | 0.769 | deleterious | None | None | None | None | I |
V/G | 0.2734 | likely_benign | 0.2741 | benign | -0.901 | Destabilizing | 0.89 | D | 0.771 | deleterious | N | 0.486911691 | None | None | I |
V/H | 0.5696 | likely_pathogenic | 0.5983 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | I |
V/I | 0.0635 | likely_benign | 0.0676 | benign | -0.421 | Destabilizing | 0.014 | N | 0.323 | neutral | N | 0.499506252 | None | None | I |
V/K | 0.3107 | likely_benign | 0.3218 | benign | -0.542 | Destabilizing | 0.956 | D | 0.812 | deleterious | None | None | None | None | I |
V/L | 0.1491 | likely_benign | 0.1722 | benign | -0.421 | Destabilizing | 0.014 | N | 0.325 | neutral | N | 0.455446044 | None | None | I |
V/M | 0.1155 | likely_benign | 0.129 | benign | -0.382 | Destabilizing | 0.956 | D | 0.714 | prob.delet. | None | None | None | None | I |
V/N | 0.3203 | likely_benign | 0.3572 | ambiguous | -0.251 | Destabilizing | 0.993 | D | 0.817 | deleterious | None | None | None | None | I |
V/P | 0.3155 | likely_benign | 0.3491 | ambiguous | -0.488 | Destabilizing | 0.978 | D | 0.815 | deleterious | None | None | None | None | I |
V/Q | 0.3056 | likely_benign | 0.3332 | benign | -0.512 | Destabilizing | 0.993 | D | 0.819 | deleterious | None | None | None | None | I |
V/R | 0.2709 | likely_benign | 0.2822 | benign | 0.015 | Stabilizing | 0.978 | D | 0.816 | deleterious | None | None | None | None | I |
V/S | 0.2195 | likely_benign | 0.2343 | benign | -0.692 | Destabilizing | 0.915 | D | 0.771 | deleterious | None | None | None | None | I |
V/T | 0.1264 | likely_benign | 0.1429 | benign | -0.688 | Destabilizing | 0.86 | D | 0.645 | neutral | None | None | None | None | I |
V/W | 0.7221 | likely_pathogenic | 0.7315 | pathogenic | -0.878 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
V/Y | 0.5147 | ambiguous | 0.5399 | ambiguous | -0.591 | Destabilizing | 0.978 | D | 0.768 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.