Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27656 | 83191;83192;83193 | chr2:178563166;178563165;178563164 | chr2:179427893;179427892;179427891 |
N2AB | 26015 | 78268;78269;78270 | chr2:178563166;178563165;178563164 | chr2:179427893;179427892;179427891 |
N2A | 25088 | 75487;75488;75489 | chr2:178563166;178563165;178563164 | chr2:179427893;179427892;179427891 |
N2B | 18591 | 55996;55997;55998 | chr2:178563166;178563165;178563164 | chr2:179427893;179427892;179427891 |
Novex-1 | 18716 | 56371;56372;56373 | chr2:178563166;178563165;178563164 | chr2:179427893;179427892;179427891 |
Novex-2 | 18783 | 56572;56573;56574 | chr2:178563166;178563165;178563164 | chr2:179427893;179427892;179427891 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.988 | N | 0.647 | 0.507 | 0.449669948863 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
E/K | rs1001344341 | None | 0.067 | N | 0.342 | 0.211 | None | gnomAD-4.0.0 | 2.05272E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69853E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.339 | likely_benign | 0.3179 | benign | -0.438 | Destabilizing | 0.919 | D | 0.605 | neutral | N | 0.478116734 | None | None | I |
E/C | 0.9366 | likely_pathogenic | 0.9259 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
E/D | 0.1694 | likely_benign | 0.1902 | benign | -0.428 | Destabilizing | 0.958 | D | 0.525 | neutral | N | 0.509419388 | None | None | I |
E/F | 0.8841 | likely_pathogenic | 0.8658 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/G | 0.4164 | ambiguous | 0.3911 | ambiguous | -0.638 | Destabilizing | 0.988 | D | 0.647 | neutral | N | 0.489459813 | None | None | I |
E/H | 0.7642 | likely_pathogenic | 0.724 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
E/I | 0.544 | ambiguous | 0.502 | ambiguous | 0.059 | Stabilizing | 0.995 | D | 0.73 | prob.delet. | None | None | None | None | I |
E/K | 0.3136 | likely_benign | 0.2775 | benign | 0.076 | Stabilizing | 0.067 | N | 0.342 | neutral | N | 0.513747773 | None | None | I |
E/L | 0.577 | likely_pathogenic | 0.5365 | ambiguous | 0.059 | Stabilizing | 0.991 | D | 0.702 | prob.neutral | None | None | None | None | I |
E/M | 0.626 | likely_pathogenic | 0.5945 | pathogenic | 0.141 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
E/N | 0.46 | ambiguous | 0.4662 | ambiguous | -0.121 | Destabilizing | 0.991 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/P | 0.6208 | likely_pathogenic | 0.5991 | pathogenic | -0.087 | Destabilizing | 0.995 | D | 0.721 | prob.delet. | None | None | None | None | I |
E/Q | 0.2632 | likely_benign | 0.232 | benign | -0.101 | Destabilizing | 0.958 | D | 0.656 | neutral | N | 0.477382719 | None | None | I |
E/R | 0.5275 | ambiguous | 0.4733 | ambiguous | 0.344 | Stabilizing | 0.982 | D | 0.695 | prob.neutral | None | None | None | None | I |
E/S | 0.3961 | ambiguous | 0.3882 | ambiguous | -0.32 | Destabilizing | 0.968 | D | 0.618 | neutral | None | None | None | None | I |
E/T | 0.4665 | ambiguous | 0.4569 | ambiguous | -0.168 | Destabilizing | 0.991 | D | 0.674 | neutral | None | None | None | None | I |
E/V | 0.3714 | ambiguous | 0.3392 | benign | -0.087 | Destabilizing | 0.988 | D | 0.709 | prob.delet. | N | 0.4855627 | None | None | I |
E/W | 0.9718 | likely_pathogenic | 0.9656 | pathogenic | -0.22 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
E/Y | 0.8065 | likely_pathogenic | 0.7865 | pathogenic | -0.124 | Destabilizing | 0.998 | D | 0.73 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.