Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27657 | 83194;83195;83196 | chr2:178563163;178563162;178563161 | chr2:179427890;179427889;179427888 |
N2AB | 26016 | 78271;78272;78273 | chr2:178563163;178563162;178563161 | chr2:179427890;179427889;179427888 |
N2A | 25089 | 75490;75491;75492 | chr2:178563163;178563162;178563161 | chr2:179427890;179427889;179427888 |
N2B | 18592 | 55999;56000;56001 | chr2:178563163;178563162;178563161 | chr2:179427890;179427889;179427888 |
Novex-1 | 18717 | 56374;56375;56376 | chr2:178563163;178563162;178563161 | chr2:179427890;179427889;179427888 |
Novex-2 | 18784 | 56575;56576;56577 | chr2:178563163;178563162;178563161 | chr2:179427890;179427889;179427888 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.961 | N | 0.459 | 0.296 | 0.387042434762 | gnomAD-4.0.0 | 1.59139E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85869E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0985 | likely_benign | 0.0935 | benign | -1.24 | Destabilizing | 0.248 | N | 0.333 | neutral | N | 0.470315147 | None | None | I |
P/C | 0.5368 | ambiguous | 0.5405 | ambiguous | -0.735 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
P/D | 0.7386 | likely_pathogenic | 0.7233 | pathogenic | -1.235 | Destabilizing | 0.985 | D | 0.507 | neutral | None | None | None | None | I |
P/E | 0.574 | likely_pathogenic | 0.5497 | ambiguous | -1.326 | Destabilizing | 0.97 | D | 0.459 | neutral | None | None | None | None | I |
P/F | 0.5281 | ambiguous | 0.5202 | ambiguous | -1.26 | Destabilizing | 0.996 | D | 0.696 | prob.neutral | None | None | None | None | I |
P/G | 0.4919 | ambiguous | 0.4673 | ambiguous | -1.446 | Destabilizing | 0.97 | D | 0.551 | neutral | None | None | None | None | I |
P/H | 0.2759 | likely_benign | 0.289 | benign | -0.971 | Destabilizing | 0.071 | N | 0.469 | neutral | N | 0.467570123 | None | None | I |
P/I | 0.5797 | likely_pathogenic | 0.5218 | ambiguous | -0.809 | Destabilizing | 0.996 | D | 0.659 | neutral | None | None | None | None | I |
P/K | 0.6827 | likely_pathogenic | 0.6518 | pathogenic | -1.006 | Destabilizing | 0.97 | D | 0.479 | neutral | None | None | None | None | I |
P/L | 0.2995 | likely_benign | 0.26 | benign | -0.809 | Destabilizing | 0.961 | D | 0.609 | neutral | N | 0.519841745 | None | None | I |
P/M | 0.5047 | ambiguous | 0.467 | ambiguous | -0.506 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
P/N | 0.6061 | likely_pathogenic | 0.5826 | pathogenic | -0.67 | Destabilizing | 0.991 | D | 0.576 | neutral | None | None | None | None | I |
P/Q | 0.4093 | ambiguous | 0.3864 | ambiguous | -0.991 | Destabilizing | 0.996 | D | 0.554 | neutral | None | None | None | None | I |
P/R | 0.53 | ambiguous | 0.4976 | ambiguous | -0.346 | Destabilizing | 0.989 | D | 0.574 | neutral | D | 0.532883572 | None | None | I |
P/S | 0.2215 | likely_benign | 0.2058 | benign | -1.045 | Destabilizing | 0.925 | D | 0.487 | neutral | N | 0.482178431 | None | None | I |
P/T | 0.2478 | likely_benign | 0.2209 | benign | -1.048 | Destabilizing | 0.961 | D | 0.459 | neutral | N | 0.489686849 | None | None | I |
P/V | 0.387 | ambiguous | 0.3462 | ambiguous | -0.918 | Destabilizing | 0.97 | D | 0.552 | neutral | None | None | None | None | I |
P/W | 0.6978 | likely_pathogenic | 0.702 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | I |
P/Y | 0.4954 | ambiguous | 0.4951 | ambiguous | -1.077 | Destabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.