Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27665 | 83218;83219;83220 | chr2:178563139;178563138;178563137 | chr2:179427866;179427865;179427864 |
N2AB | 26024 | 78295;78296;78297 | chr2:178563139;178563138;178563137 | chr2:179427866;179427865;179427864 |
N2A | 25097 | 75514;75515;75516 | chr2:178563139;178563138;178563137 | chr2:179427866;179427865;179427864 |
N2B | 18600 | 56023;56024;56025 | chr2:178563139;178563138;178563137 | chr2:179427866;179427865;179427864 |
Novex-1 | 18725 | 56398;56399;56400 | chr2:178563139;178563138;178563137 | chr2:179427866;179427865;179427864 |
Novex-2 | 18792 | 56599;56600;56601 | chr2:178563139;178563138;178563137 | chr2:179427866;179427865;179427864 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | None | N | 0.354 | 0.084 | 0.300449992093 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/G | rs1704304364 | None | 0.013 | N | 0.461 | 0.189 | 0.436132833422 | gnomAD-4.0.0 | 6.84237E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15931E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1096 | likely_benign | 0.1061 | benign | -1.298 | Destabilizing | None | N | 0.134 | neutral | N | 0.519356741 | None | None | N |
V/C | 0.5492 | ambiguous | 0.5459 | ambiguous | -1.03 | Destabilizing | 0.204 | N | 0.309 | neutral | None | None | None | None | N |
V/D | 0.3737 | ambiguous | 0.3434 | ambiguous | -1.162 | Destabilizing | 0.026 | N | 0.58 | neutral | N | 0.490705986 | None | None | N |
V/E | 0.2303 | likely_benign | 0.2135 | benign | -1.211 | Destabilizing | 0.035 | N | 0.504 | neutral | None | None | None | None | N |
V/F | 0.1133 | likely_benign | 0.1134 | benign | -1.213 | Destabilizing | None | N | 0.354 | neutral | N | 0.520396891 | None | None | N |
V/G | 0.2071 | likely_benign | 0.1891 | benign | -1.552 | Destabilizing | 0.013 | N | 0.461 | neutral | N | 0.490452496 | None | None | N |
V/H | 0.3601 | ambiguous | 0.3498 | ambiguous | -1.018 | Destabilizing | 0.204 | N | 0.427 | neutral | None | None | None | None | N |
V/I | 0.0619 | likely_benign | 0.0678 | benign | -0.725 | Destabilizing | None | N | 0.055 | neutral | N | 0.430852322 | None | None | N |
V/K | 0.1718 | likely_benign | 0.1576 | benign | -0.983 | Destabilizing | 0.018 | N | 0.407 | neutral | None | None | None | None | N |
V/L | 0.0863 | likely_benign | 0.0951 | benign | -0.725 | Destabilizing | None | N | 0.065 | neutral | N | 0.462500594 | None | None | N |
V/M | 0.0836 | likely_benign | 0.0942 | benign | -0.552 | Destabilizing | 0.112 | N | 0.363 | neutral | None | None | None | None | N |
V/N | 0.2126 | likely_benign | 0.2121 | benign | -0.778 | Destabilizing | 0.035 | N | 0.604 | neutral | None | None | None | None | N |
V/P | 0.3115 | likely_benign | 0.2936 | benign | -0.88 | Destabilizing | 0.112 | N | 0.595 | neutral | None | None | None | None | N |
V/Q | 0.1965 | likely_benign | 0.1824 | benign | -1.042 | Destabilizing | 0.112 | N | 0.57 | neutral | None | None | None | None | N |
V/R | 0.1704 | likely_benign | 0.1495 | benign | -0.399 | Destabilizing | None | N | 0.4 | neutral | None | None | None | None | N |
V/S | 0.1562 | likely_benign | 0.148 | benign | -1.272 | Destabilizing | 0.007 | N | 0.35 | neutral | None | None | None | None | N |
V/T | 0.0999 | likely_benign | 0.1044 | benign | -1.217 | Destabilizing | None | N | 0.178 | neutral | None | None | None | None | N |
V/W | 0.6003 | likely_pathogenic | 0.5953 | pathogenic | -1.305 | Destabilizing | 0.747 | D | 0.449 | neutral | None | None | None | None | N |
V/Y | 0.3754 | ambiguous | 0.3677 | ambiguous | -1.012 | Destabilizing | 0.018 | N | 0.48 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.