Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27666 | 83221;83222;83223 | chr2:178563136;178563135;178563134 | chr2:179427863;179427862;179427861 |
N2AB | 26025 | 78298;78299;78300 | chr2:178563136;178563135;178563134 | chr2:179427863;179427862;179427861 |
N2A | 25098 | 75517;75518;75519 | chr2:178563136;178563135;178563134 | chr2:179427863;179427862;179427861 |
N2B | 18601 | 56026;56027;56028 | chr2:178563136;178563135;178563134 | chr2:179427863;179427862;179427861 |
Novex-1 | 18726 | 56401;56402;56403 | chr2:178563136;178563135;178563134 | chr2:179427863;179427862;179427861 |
Novex-2 | 18793 | 56602;56603;56604 | chr2:178563136;178563135;178563134 | chr2:179427863;179427862;179427861 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.376 | D | 0.55 | 0.312 | 0.472181857204 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4665 | ambiguous | 0.4508 | ambiguous | -2.169 | Highly Destabilizing | 0.977 | D | 0.671 | prob.neutral | None | None | None | None | N |
A/D | 0.9764 | likely_pathogenic | 0.9679 | pathogenic | -3.179 | Highly Destabilizing | 0.808 | D | 0.723 | deleterious | D | 0.525215748 | None | None | N |
A/E | 0.9454 | likely_pathogenic | 0.9267 | pathogenic | -3.012 | Highly Destabilizing | 0.848 | D | 0.697 | prob.delet. | None | None | None | None | N |
A/F | 0.7969 | likely_pathogenic | 0.7718 | pathogenic | -0.74 | Destabilizing | 0.848 | D | 0.738 | deleterious | None | None | None | None | N |
A/G | 0.4018 | ambiguous | 0.3491 | ambiguous | -1.598 | Destabilizing | 0.376 | N | 0.55 | neutral | D | 0.526229706 | None | None | N |
A/H | 0.9674 | likely_pathogenic | 0.956 | pathogenic | -1.506 | Destabilizing | 0.992 | D | 0.741 | deleterious | None | None | None | None | N |
A/I | 0.2422 | likely_benign | 0.2361 | benign | -0.355 | Destabilizing | 0.215 | N | 0.678 | prob.neutral | None | None | None | None | N |
A/K | 0.9742 | likely_pathogenic | 0.9628 | pathogenic | -1.373 | Destabilizing | 0.848 | D | 0.695 | prob.delet. | None | None | None | None | N |
A/L | 0.2325 | likely_benign | 0.2022 | benign | -0.355 | Destabilizing | 0.444 | N | 0.61 | neutral | None | None | None | None | N |
A/M | 0.4126 | ambiguous | 0.3909 | ambiguous | -1.071 | Destabilizing | 0.955 | D | 0.692 | prob.delet. | None | None | None | None | N |
A/N | 0.8688 | likely_pathogenic | 0.8498 | pathogenic | -1.899 | Destabilizing | 0.848 | D | 0.751 | deleterious | None | None | None | None | N |
A/P | 0.1781 | likely_benign | 0.1633 | benign | -0.623 | Destabilizing | 0.895 | D | 0.697 | prob.delet. | N | 0.516452509 | None | None | N |
A/Q | 0.9077 | likely_pathogenic | 0.8822 | pathogenic | -1.794 | Destabilizing | 0.848 | D | 0.663 | prob.neutral | None | None | None | None | N |
A/R | 0.9376 | likely_pathogenic | 0.9147 | pathogenic | -1.332 | Destabilizing | 0.848 | D | 0.709 | prob.delet. | None | None | None | None | N |
A/S | 0.2231 | likely_benign | 0.2103 | benign | -2.13 | Highly Destabilizing | 0.036 | N | 0.302 | neutral | D | 0.525215748 | None | None | N |
A/T | 0.159 | likely_benign | 0.1552 | benign | -1.865 | Destabilizing | 0.016 | N | 0.341 | neutral | D | 0.530168381 | None | None | N |
A/V | 0.0992 | likely_benign | 0.0991 | benign | -0.623 | Destabilizing | 0.009 | N | 0.325 | neutral | N | 0.50571544 | None | None | N |
A/W | 0.9793 | likely_pathogenic | 0.9741 | pathogenic | -1.298 | Destabilizing | 0.992 | D | 0.731 | deleterious | None | None | None | None | N |
A/Y | 0.9487 | likely_pathogenic | 0.9349 | pathogenic | -0.905 | Destabilizing | 0.919 | D | 0.739 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.