Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27677 | 83254;83255;83256 | chr2:178563103;178563102;178563101 | chr2:179427830;179427829;179427828 |
N2AB | 26036 | 78331;78332;78333 | chr2:178563103;178563102;178563101 | chr2:179427830;179427829;179427828 |
N2A | 25109 | 75550;75551;75552 | chr2:178563103;178563102;178563101 | chr2:179427830;179427829;179427828 |
N2B | 18612 | 56059;56060;56061 | chr2:178563103;178563102;178563101 | chr2:179427830;179427829;179427828 |
Novex-1 | 18737 | 56434;56435;56436 | chr2:178563103;178563102;178563101 | chr2:179427830;179427829;179427828 |
Novex-2 | 18804 | 56635;56636;56637 | chr2:178563103;178563102;178563101 | chr2:179427830;179427829;179427828 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs1704290061 | None | 0.999 | N | 0.457 | 0.257 | 0.439551795455 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/I | rs1704290061 | None | 0.999 | N | 0.457 | 0.257 | 0.439551795455 | gnomAD-4.0.0 | 6.57393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47016E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9416 | likely_pathogenic | 0.9319 | pathogenic | -1.327 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
L/C | 0.9794 | likely_pathogenic | 0.9709 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/D | 0.9969 | likely_pathogenic | 0.9957 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/E | 0.9861 | likely_pathogenic | 0.9826 | pathogenic | -0.497 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/F | 0.8333 | likely_pathogenic | 0.7971 | pathogenic | -0.943 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.51035395 | None | None | N |
L/G | 0.986 | likely_pathogenic | 0.9811 | pathogenic | -1.618 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/H | 0.9865 | likely_pathogenic | 0.9774 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.534245103 | None | None | N |
L/I | 0.3075 | likely_benign | 0.316 | benign | -0.626 | Destabilizing | 0.999 | D | 0.457 | neutral | N | 0.499616302 | None | None | N |
L/K | 0.9712 | likely_pathogenic | 0.9599 | pathogenic | -0.827 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
L/M | 0.3648 | ambiguous | 0.3506 | ambiguous | -0.566 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
L/N | 0.9859 | likely_pathogenic | 0.9808 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/P | 0.9574 | likely_pathogenic | 0.9345 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.786 | deleterious | N | 0.511025513 | None | None | N |
L/Q | 0.9726 | likely_pathogenic | 0.9592 | pathogenic | -0.767 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/R | 0.9646 | likely_pathogenic | 0.9475 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.774 | deleterious | D | 0.533991614 | None | None | N |
L/S | 0.9902 | likely_pathogenic | 0.986 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/T | 0.9027 | likely_pathogenic | 0.8849 | pathogenic | -1.121 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
L/V | 0.4534 | ambiguous | 0.4494 | ambiguous | -0.826 | Destabilizing | 0.999 | D | 0.506 | neutral | N | 0.512591995 | None | None | N |
L/W | 0.9295 | likely_pathogenic | 0.8984 | pathogenic | -0.963 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
L/Y | 0.9691 | likely_pathogenic | 0.9561 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.