Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 27679 | 83260;83261;83262 | chr2:178563097;178563096;178563095 | chr2:179427824;179427823;179427822 |
N2AB | 26038 | 78337;78338;78339 | chr2:178563097;178563096;178563095 | chr2:179427824;179427823;179427822 |
N2A | 25111 | 75556;75557;75558 | chr2:178563097;178563096;178563095 | chr2:179427824;179427823;179427822 |
N2B | 18614 | 56065;56066;56067 | chr2:178563097;178563096;178563095 | chr2:179427824;179427823;179427822 |
Novex-1 | 18739 | 56440;56441;56442 | chr2:178563097;178563096;178563095 | chr2:179427824;179427823;179427822 |
Novex-2 | 18806 | 56641;56642;56643 | chr2:178563097;178563096;178563095 | chr2:179427824;179427823;179427822 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1704286522 | None | 0.999 | N | 0.707 | 0.278 | 0.308278614506 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85873E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7643 | likely_pathogenic | 0.7476 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
A/D | 0.8759 | likely_pathogenic | 0.8317 | pathogenic | -0.601 | Destabilizing | 0.999 | D | 0.748 | deleterious | D | 0.530304454 | None | None | N |
A/E | 0.8492 | likely_pathogenic | 0.7753 | pathogenic | -0.759 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
A/F | 0.7536 | likely_pathogenic | 0.729 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
A/G | 0.3041 | likely_benign | 0.2848 | benign | -0.349 | Destabilizing | 0.434 | N | 0.371 | neutral | N | 0.513988207 | None | None | N |
A/H | 0.8643 | likely_pathogenic | 0.8251 | pathogenic | -0.433 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
A/I | 0.5548 | ambiguous | 0.5185 | ambiguous | -0.316 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
A/K | 0.9236 | likely_pathogenic | 0.8705 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
A/L | 0.4103 | ambiguous | 0.3663 | ambiguous | -0.316 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
A/M | 0.4606 | ambiguous | 0.4171 | ambiguous | -0.295 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
A/N | 0.6305 | likely_pathogenic | 0.5758 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
A/P | 0.4877 | ambiguous | 0.4419 | ambiguous | -0.272 | Destabilizing | 1.0 | D | 0.769 | deleterious | N | 0.48670306 | None | None | N |
A/Q | 0.7538 | likely_pathogenic | 0.6756 | pathogenic | -0.594 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
A/R | 0.866 | likely_pathogenic | 0.8008 | pathogenic | -0.205 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
A/S | 0.1647 | likely_benign | 0.154 | benign | -0.471 | Destabilizing | 0.996 | D | 0.588 | neutral | N | 0.51102526 | None | None | N |
A/T | 0.2126 | likely_benign | 0.1952 | benign | -0.555 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | N | 0.481966119 | None | None | N |
A/V | 0.2733 | likely_benign | 0.2535 | benign | -0.272 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.510158468 | None | None | N |
A/W | 0.9527 | likely_pathogenic | 0.9393 | pathogenic | -1.069 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
A/Y | 0.8533 | likely_pathogenic | 0.8237 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.