Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2768 | 8527;8528;8529 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
N2AB | 2768 | 8527;8528;8529 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
N2A | 2768 | 8527;8528;8529 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
N2B | 2722 | 8389;8390;8391 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
Novex-1 | 2722 | 8389;8390;8391 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
Novex-2 | 2722 | 8389;8390;8391 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
Novex-3 | 2768 | 8527;8528;8529 | chr2:178770490;178770489;178770488 | chr2:179635217;179635216;179635215 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | rs747393998 | 0.193 | 0.984 | D | 0.607 | 0.712 | 0.902507848322 | gnomAD-2.1.1 | 7.97E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.77E-05 | 0 |
N/I | rs747393998 | 0.193 | 0.984 | D | 0.607 | 0.712 | 0.902507848322 | gnomAD-4.0.0 | 1.59051E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85646E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3067 | likely_benign | 0.3982 | ambiguous | -0.337 | Destabilizing | 0.919 | D | 0.462 | neutral | None | None | None | None | N |
N/C | 0.3702 | ambiguous | 0.5131 | ambiguous | 0.524 | Stabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
N/D | 0.1152 | likely_benign | 0.1187 | benign | -0.438 | Destabilizing | 0.896 | D | 0.421 | neutral | D | 0.535645774 | None | None | N |
N/E | 0.3582 | ambiguous | 0.3973 | ambiguous | -0.452 | Destabilizing | 0.919 | D | 0.38 | neutral | None | None | None | None | N |
N/F | 0.6091 | likely_pathogenic | 0.7258 | pathogenic | -0.615 | Destabilizing | 0.988 | D | 0.603 | neutral | None | None | None | None | N |
N/G | 0.2976 | likely_benign | 0.3644 | ambiguous | -0.553 | Destabilizing | 0.919 | D | 0.379 | neutral | None | None | None | None | N |
N/H | 0.1085 | likely_benign | 0.1284 | benign | -0.674 | Destabilizing | 0.059 | N | 0.308 | neutral | D | 0.541252459 | None | None | N |
N/I | 0.4584 | ambiguous | 0.6039 | pathogenic | 0.156 | Stabilizing | 0.984 | D | 0.607 | neutral | D | 0.667520784 | None | None | N |
N/K | 0.2864 | likely_benign | 0.3111 | benign | 0.028 | Stabilizing | 0.103 | N | 0.315 | neutral | D | 0.547915958 | None | None | N |
N/L | 0.4224 | ambiguous | 0.54 | ambiguous | 0.156 | Stabilizing | 0.976 | D | 0.524 | neutral | None | None | None | None | N |
N/M | 0.4454 | ambiguous | 0.5546 | ambiguous | 0.785 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
N/P | 0.8902 | likely_pathogenic | 0.9367 | pathogenic | 0.019 | Stabilizing | 0.996 | D | 0.532 | neutral | None | None | None | None | N |
N/Q | 0.3011 | likely_benign | 0.3464 | ambiguous | -0.505 | Destabilizing | 0.976 | D | 0.363 | neutral | None | None | None | None | N |
N/R | 0.3505 | ambiguous | 0.3961 | ambiguous | 0.126 | Stabilizing | 0.851 | D | 0.357 | neutral | None | None | None | None | N |
N/S | 0.128 | likely_benign | 0.1488 | benign | -0.194 | Destabilizing | 0.896 | D | 0.417 | neutral | D | 0.547203503 | None | None | N |
N/T | 0.2182 | likely_benign | 0.2919 | benign | -0.068 | Destabilizing | 0.946 | D | 0.369 | neutral | D | 0.605896078 | None | None | N |
N/V | 0.4484 | ambiguous | 0.5846 | pathogenic | 0.019 | Stabilizing | 0.988 | D | 0.597 | neutral | None | None | None | None | N |
N/W | 0.8052 | likely_pathogenic | 0.8639 | pathogenic | -0.565 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
N/Y | 0.1698 | likely_benign | 0.2201 | benign | -0.301 | Destabilizing | 0.968 | D | 0.531 | neutral | D | 0.667608389 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.